Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccne1Q61457 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccne1Q61457 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.23■□□□□ 0.99
Ccne1Q61457 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccne1Q61457 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccne1Q61457 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccne1Q61457 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Ccne1Q61457 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccne1Q61457 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccne1Q61457 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC21.23■□□□□ 0.99
Ccne1Q61457 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ccne1Q61457 Gm6858-201ENSMUST00000208582 1468 ntBASIC21.23■□□□□ 0.99
Ccne1Q61457 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.23■□□□□ 0.99
Ccne1Q61457 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC21.23■□□□□ 0.99
Ccne1Q61457 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccne1Q61457 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC21.23■□□□□ 0.99
Ccne1Q61457 Gm11841-201ENSMUST00000117060 1963 ntBASIC21.23■□□□□ 0.99
Ccne1Q61457 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ccne1Q61457 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ccne1Q61457 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccne1Q61457 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
Ccne1Q61457 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccne1Q61457 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccne1Q61457 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccne1Q61457 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ccne1Q61457 AC132265.1-201ENSMUST00000219233 1665 ntBASIC21.22■□□□□ 0.99
Ccne1Q61457 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccne1Q61457 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccne1Q61457 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccne1Q61457 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccne1Q61457 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC21.22■□□□□ 0.99
Ccne1Q61457 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC21.22■□□□□ 0.99
Ccne1Q61457 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccne1Q61457 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccne1Q61457 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccne1Q61457 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ccne1Q61457 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.22■□□□□ 0.99
Ccne1Q61457 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccne1Q61457 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ccne1Q61457 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccne1Q61457 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccne1Q61457 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Ccne1Q61457 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccne1Q61457 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccne1Q61457 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccne1Q61457 Gm13036-201ENSMUST00000117799 748 ntBASIC21.21■□□□□ 0.99
Ccne1Q61457 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC21.21■□□□□ 0.99
Ccne1Q61457 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC21.21■□□□□ 0.99
Ccne1Q61457 Gm27628-201ENSMUST00000184911 107 ntBASIC21.21■□□□□ 0.99
Ccne1Q61457 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccne1Q61457 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ccne1Q61457 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ccne1Q61457 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccne1Q61457 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccne1Q61457 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ccne1Q61457 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccne1Q61457 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccne1Q61457 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccne1Q61457 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccne1Q61457 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccne1Q61457 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccne1Q61457 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ccne1Q61457 Gm5837-201ENSMUST00000191844 1369 ntBASIC21.21■□□□□ 0.99
Ccne1Q61457 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccne1Q61457 Gm37500-201ENSMUST00000192059 1443 ntBASIC21.21■□□□□ 0.99
Ccne1Q61457 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ccne1Q61457 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccne1Q61457 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccne1Q61457 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC21.2■□□□□ 0.98
Ccne1Q61457 Gm15467-201ENSMUST00000120582 445 ntBASIC21.2■□□□□ 0.98
Ccne1Q61457 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ccne1Q61457 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC21.2■□□□□ 0.98
Ccne1Q61457 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Ccne1Q61457 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccne1Q61457 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC21.2■□□□□ 0.98
Ccne1Q61457 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccne1Q61457 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccne1Q61457 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC21.2■□□□□ 0.98
Ccne1Q61457 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccne1Q61457 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccne1Q61457 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccne1Q61457 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccne1Q61457 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccne1Q61457 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccne1Q61457 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC21.19■□□□□ 0.98
Ccne1Q61457 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccne1Q61457 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccne1Q61457 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccne1Q61457 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccne1Q61457 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccne1Q61457 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ccne1Q61457 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC21.19■□□□□ 0.98
Ccne1Q61457 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC21.19■□□□□ 0.98
Ccne1Q61457 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ccne1Q61457 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ccne1Q61457 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ccne1Q61457 Gm15743-202ENSMUST00000182690 1901 ntBASIC21.19■□□□□ 0.98
Ccne1Q61457 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccne1Q61457 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ccne1Q61457 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms