Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Col12a1Q60847 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col12a1Q60847 Gm27301-201ENSMUST00000184012 127 ntBASIC16.1■□□□□ 0.17
Col12a1Q60847 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.1■□□□□ 0.17
Col12a1Q60847 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col12a1Q60847 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col12a1Q60847 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col12a1Q60847 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.1■□□□□ 0.17
Col12a1Q60847 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.1■□□□□ 0.17
Col12a1Q60847 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col12a1Q60847 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col12a1Q60847 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col12a1Q60847 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col12a1Q60847 Gm13823-201ENSMUST00000119930 345 ntBASIC16.1■□□□□ 0.17
Col12a1Q60847 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.1■□□□□ 0.17
Col12a1Q60847 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.1■□□□□ 0.17
Col12a1Q60847 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.1■□□□□ 0.17
Col12a1Q60847 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col12a1Q60847 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col12a1Q60847 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col12a1Q60847 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col12a1Q60847 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.1■□□□□ 0.17
Col12a1Q60847 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col12a1Q60847 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col12a1Q60847 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Col12a1Q60847 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col12a1Q60847 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col12a1Q60847 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Col12a1Q60847 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col12a1Q60847 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.09■□□□□ 0.17
Col12a1Q60847 Gm7653-201ENSMUST00000214567 508 ntBASIC16.09■□□□□ 0.17
Col12a1Q60847 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col12a1Q60847 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Col12a1Q60847 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col12a1Q60847 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col12a1Q60847 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Col12a1Q60847 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col12a1Q60847 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col12a1Q60847 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col12a1Q60847 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col12a1Q60847 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col12a1Q60847 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Col12a1Q60847 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Col12a1Q60847 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Col12a1Q60847 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.08■□□□□ 0.17
Col12a1Q60847 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col12a1Q60847 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col12a1Q60847 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Col12a1Q60847 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.08■□□□□ 0.17
Col12a1Q60847 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.08■□□□□ 0.17
Col12a1Q60847 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Col12a1Q60847 Gm18889-201ENSMUST00000174284 929 ntBASIC16.08■□□□□ 0.17
Col12a1Q60847 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Col12a1Q60847 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col12a1Q60847 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Col12a1Q60847 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col12a1Q60847 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col12a1Q60847 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col12a1Q60847 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col12a1Q60847 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Col12a1Q60847 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Col12a1Q60847 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col12a1Q60847 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.08■□□□□ 0.16
Col12a1Q60847 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col12a1Q60847 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col12a1Q60847 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col12a1Q60847 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col12a1Q60847 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col12a1Q60847 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col12a1Q60847 Gm22175-201ENSMUST00000175007 78 ntBASIC16.08■□□□□ 0.16
Col12a1Q60847 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col12a1Q60847 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col12a1Q60847 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col12a1Q60847 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Col12a1Q60847 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col12a1Q60847 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col12a1Q60847 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col12a1Q60847 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col12a1Q60847 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col12a1Q60847 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.07■□□□□ 0.16
Col12a1Q60847 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col12a1Q60847 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Col12a1Q60847 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Col12a1Q60847 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col12a1Q60847 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col12a1Q60847 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col12a1Q60847 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Col12a1Q60847 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col12a1Q60847 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col12a1Q60847 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col12a1Q60847 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Col12a1Q60847 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col12a1Q60847 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.07■□□□□ 0.16
Col12a1Q60847 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.07■□□□□ 0.16
Col12a1Q60847 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.07■□□□□ 0.16
Col12a1Q60847 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.07■□□□□ 0.16
Col12a1Q60847 Gm45167-201ENSMUST00000208007 322 ntBASIC16.07■□□□□ 0.16
Col12a1Q60847 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Col12a1Q60847 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col12a1Q60847 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms