Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nr1h4Q60641 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1h4Q60641 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.62■□□□□ 0.09
Nr1h4Q60641 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.62■□□□□ 0.09
Nr1h4Q60641 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1h4Q60641 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1h4Q60641 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1h4Q60641 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1h4Q60641 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1h4Q60641 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.61■□□□□ 0.09
Nr1h4Q60641 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1h4Q60641 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Nr1h4Q60641 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1h4Q60641 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Nr1h4Q60641 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Nr1h4Q60641 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1h4Q60641 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Nr1h4Q60641 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.61■□□□□ 0.09
Nr1h4Q60641 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.61■□□□□ 0.09
Nr1h4Q60641 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Nr1h4Q60641 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1h4Q60641 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1h4Q60641 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1h4Q60641 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1h4Q60641 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1h4Q60641 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1h4Q60641 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.6■□□□□ 0.09
Nr1h4Q60641 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1h4Q60641 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Nr1h4Q60641 Gm12085-201ENSMUST00000119263 940 ntBASIC15.6■□□□□ 0.09
Nr1h4Q60641 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Nr1h4Q60641 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.6■□□□□ 0.09
Nr1h4Q60641 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Nr1h4Q60641 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1h4Q60641 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1h4Q60641 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1h4Q60641 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Nr1h4Q60641 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1h4Q60641 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.6■□□□□ 0.09
Nr1h4Q60641 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1h4Q60641 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1h4Q60641 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1h4Q60641 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1h4Q60641 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1h4Q60641 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1h4Q60641 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1h4Q60641 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1h4Q60641 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.59■□□□□ 0.09
Nr1h4Q60641 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1h4Q60641 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1h4Q60641 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1h4Q60641 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1h4Q60641 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1h4Q60641 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1h4Q60641 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1h4Q60641 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1h4Q60641 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1h4Q60641 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.59■□□□□ 0.09
Nr1h4Q60641 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Nr1h4Q60641 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1h4Q60641 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nr1h4Q60641 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nr1h4Q60641 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Nr1h4Q60641 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nr1h4Q60641 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nr1h4Q60641 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nr1h4Q60641 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nr1h4Q60641 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1h4Q60641 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1h4Q60641 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1h4Q60641 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1h4Q60641 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1h4Q60641 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nr1h4Q60641 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms