Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Trav2Q5R1I9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Gm44430-201ENSMUST00000203376 995 ntBASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav2Q5R1I9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Rprl3-201ENSMUST00000157400 290 ntBASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav2Q5R1I9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav2Q5R1I9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms