Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm28536-201ENSMUST00000190971 1317 ntBASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Gm44544-201ENSMUST00000207052 1844 ntBASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3-1Q5R1I8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3-1Q5R1I8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3-1Q5R1I8 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Idnk-204ENSMUST00000226010 1898 ntBASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms