Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.15□□□□□ -0.3
Trav6-3Q5R1E6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6-3Q5R1E6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6-3Q5R1E6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6-3Q5R1E6 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Gm10812-201ENSMUST00000099864 546 ntBASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Trav6-3Q5R1E6 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Gm13474-201ENSMUST00000122466 815 ntBASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Gm7370-201ENSMUST00000219471 767 ntBASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-3Q5R1E6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms