Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
Pds5bQ4VA53 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC28.43■■■□□ 2.14
Pds5bQ4VA53 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
Pds5bQ4VA53 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Pds5bQ4VA53 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
Pds5bQ4VA53 AC123834.2-201ENSMUST00000224038 2340 ntBASIC28.42■■■□□ 2.14
Pds5bQ4VA53 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Pds5bQ4VA53 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Pds5bQ4VA53 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Pds5bQ4VA53 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Pds5bQ4VA53 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
Pds5bQ4VA53 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
Pds5bQ4VA53 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC28.42■■■□□ 2.14
Pds5bQ4VA53 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Pds5bQ4VA53 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
Pds5bQ4VA53 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Pds5bQ4VA53 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
Pds5bQ4VA53 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Pds5bQ4VA53 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pds5bQ4VA53 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pds5bQ4VA53 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pds5bQ4VA53 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
Pds5bQ4VA53 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pds5bQ4VA53 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pds5bQ4VA53 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pds5bQ4VA53 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC28.41■■■□□ 2.14
Pds5bQ4VA53 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pds5bQ4VA53 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Pds5bQ4VA53 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Pds5bQ4VA53 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pds5bQ4VA53 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pds5bQ4VA53 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pds5bQ4VA53 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pds5bQ4VA53 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Pds5bQ4VA53 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC28.4■■■□□ 2.14
Pds5bQ4VA53 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC28.4■■■□□ 2.14
Pds5bQ4VA53 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC28.4■■■□□ 2.14
Pds5bQ4VA53 Gm27306-201ENSMUST00000183970 107 ntBASIC28.4■■■□□ 2.14
Pds5bQ4VA53 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
Pds5bQ4VA53 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Pds5bQ4VA53 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Pds5bQ4VA53 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Pds5bQ4VA53 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
Pds5bQ4VA53 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC28.39■■■□□ 2.14
Pds5bQ4VA53 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
Pds5bQ4VA53 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
Pds5bQ4VA53 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Pds5bQ4VA53 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC28.39■■■□□ 2.14
Pds5bQ4VA53 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Pds5bQ4VA53 AC151836.1-202ENSMUST00000226259 753 ntBASIC28.39■■■□□ 2.14
Pds5bQ4VA53 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
Pds5bQ4VA53 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Pds5bQ4VA53 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Pds5bQ4VA53 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Pds5bQ4VA53 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Pds5bQ4VA53 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC28.38■■■□□ 2.13
Pds5bQ4VA53 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Pds5bQ4VA53 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
Pds5bQ4VA53 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pds5bQ4VA53 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pds5bQ4VA53 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC28.37■■■□□ 2.13
Pds5bQ4VA53 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Pds5bQ4VA53 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
Pds5bQ4VA53 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC28.37■■■□□ 2.13
Pds5bQ4VA53 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pds5bQ4VA53 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pds5bQ4VA53 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pds5bQ4VA53 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pds5bQ4VA53 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pds5bQ4VA53 Gm15693-201ENSMUST00000120470 637 ntBASIC28.36■■■□□ 2.13
Pds5bQ4VA53 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC28.36■■■□□ 2.13
Pds5bQ4VA53 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC28.36■■■□□ 2.13
Pds5bQ4VA53 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Pds5bQ4VA53 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Pds5bQ4VA53 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Pds5bQ4VA53 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Pds5bQ4VA53 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Pds5bQ4VA53 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Pds5bQ4VA53 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Pds5bQ4VA53 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC28.35■■■□□ 2.13
Pds5bQ4VA53 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Pds5bQ4VA53 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pds5bQ4VA53 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pds5bQ4VA53 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC28.35■■■□□ 2.13
Pds5bQ4VA53 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pds5bQ4VA53 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pds5bQ4VA53 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pds5bQ4VA53 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Pds5bQ4VA53 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pds5bQ4VA53 Gm24158-201ENSMUST00000175263 71 ntBASIC28.35■■■□□ 2.13
Pds5bQ4VA53 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC28.35■■■□□ 2.13
Pds5bQ4VA53 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pds5bQ4VA53 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Pds5bQ4VA53 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Pds5bQ4VA53 AC126250.1-201ENSMUST00000228343 1768 ntBASIC28.34■■■□□ 2.13
Pds5bQ4VA53 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC28.34■■■□□ 2.13
Pds5bQ4VA53 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
Pds5bQ4VA53 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Pds5bQ4VA53 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC28.34■■■□□ 2.13
Pds5bQ4VA53 Gm7653-201ENSMUST00000214567 508 ntBASIC28.34■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms