Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trim80Q3V061 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim80Q3V061 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim80Q3V061 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim80Q3V061 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim80Q3V061 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim80Q3V061 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim80Q3V061 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trim80Q3V061 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim80Q3V061 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
Trim80Q3V061 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trim80Q3V061 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim80Q3V061 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim80Q3V061 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim80Q3V061 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim80Q3V061 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim80Q3V061 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim80Q3V061 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim80Q3V061 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trim80Q3V061 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim80Q3V061 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim80Q3V061 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim80Q3V061 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim80Q3V061 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim80Q3V061 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim80Q3V061 Gm10138-203ENSMUST00000206952 366 ntBASIC16.95■□□□□ 0.3
Trim80Q3V061 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim80Q3V061 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim80Q3V061 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Trim80Q3V061 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim80Q3V061 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim80Q3V061 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim80Q3V061 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim80Q3V061 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim80Q3V061 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.94■□□□□ 0.3
Trim80Q3V061 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim80Q3V061 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim80Q3V061 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim80Q3V061 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.94■□□□□ 0.3
Trim80Q3V061 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim80Q3V061 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim80Q3V061 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim80Q3V061 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim80Q3V061 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim80Q3V061 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim80Q3V061 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.94■□□□□ 0.3
Trim80Q3V061 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trim80Q3V061 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim80Q3V061 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trim80Q3V061 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim80Q3V061 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim80Q3V061 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim80Q3V061 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim80Q3V061 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim80Q3V061 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim80Q3V061 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.94■□□□□ 0.3
Trim80Q3V061 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim80Q3V061 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim80Q3V061 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim80Q3V061 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim80Q3V061 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim80Q3V061 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim80Q3V061 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim80Q3V061 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim80Q3V061 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim80Q3V061 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim80Q3V061 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim80Q3V061 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Trim80Q3V061 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim80Q3V061 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim80Q3V061 Zfp783-201ENSMUST00000095946 670 ntBASIC16.93■□□□□ 0.3
Trim80Q3V061 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim80Q3V061 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim80Q3V061 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim80Q3V061 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim80Q3V061 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim80Q3V061 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim80Q3V061 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim80Q3V061 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.93■□□□□ 0.3
Trim80Q3V061 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim80Q3V061 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim80Q3V061 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trim80Q3V061 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
Trim80Q3V061 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim80Q3V061 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim80Q3V061 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim80Q3V061 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trim80Q3V061 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim80Q3V061 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim80Q3V061 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.92■□□□□ 0.3
Trim80Q3V061 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim80Q3V061 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim80Q3V061 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim80Q3V061 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim80Q3V061 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim80Q3V061 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim80Q3V061 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.92■□□□□ 0.3
Trim80Q3V061 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim80Q3V061 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trim80Q3V061 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms