Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ccdc27Q3V036 Gm10812-201ENSMUST00000099864 546 ntBASIC20.86■□□□□ 0.93
Ccdc27Q3V036 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC20.86■□□□□ 0.93
Ccdc27Q3V036 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc27Q3V036 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc27Q3V036 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc27Q3V036 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc27Q3V036 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc27Q3V036 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc27Q3V036 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc27Q3V036 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc27Q3V036 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc27Q3V036 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc27Q3V036 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Ccdc27Q3V036 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc27Q3V036 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc27Q3V036 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.85■□□□□ 0.93
Ccdc27Q3V036 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc27Q3V036 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc27Q3V036 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc27Q3V036 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc27Q3V036 Odf3b-204ENSMUST00000227834 930 ntBASIC20.85■□□□□ 0.93
Ccdc27Q3V036 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc27Q3V036 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc27Q3V036 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc27Q3V036 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc27Q3V036 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc27Q3V036 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Ccdc27Q3V036 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc27Q3V036 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc27Q3V036 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc27Q3V036 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc27Q3V036 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC20.84■□□□□ 0.93
Ccdc27Q3V036 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc27Q3V036 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Ccdc27Q3V036 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc27Q3V036 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc27Q3V036 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc27Q3V036 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.84■□□□□ 0.93
Ccdc27Q3V036 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc27Q3V036 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Ccdc27Q3V036 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc27Q3V036 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc27Q3V036 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc27Q3V036 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.84■□□□□ 0.93
Ccdc27Q3V036 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.84■□□□□ 0.93
Ccdc27Q3V036 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc27Q3V036 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc27Q3V036 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc27Q3V036 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc27Q3V036 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Ccdc27Q3V036 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc27Q3V036 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc27Q3V036 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc27Q3V036 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Ccdc27Q3V036 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.83■□□□□ 0.93
Ccdc27Q3V036 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc27Q3V036 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc27Q3V036 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc27Q3V036 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc27Q3V036 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc27Q3V036 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc27Q3V036 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc27Q3V036 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc27Q3V036 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc27Q3V036 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc27Q3V036 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc27Q3V036 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc27Q3V036 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ccdc27Q3V036 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc27Q3V036 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc27Q3V036 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc27Q3V036 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.82■□□□□ 0.92
Ccdc27Q3V036 Gm27000-201ENSMUST00000182943 842 ntBASIC20.82■□□□□ 0.92
Ccdc27Q3V036 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.82■□□□□ 0.92
Ccdc27Q3V036 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.82■□□□□ 0.92
Ccdc27Q3V036 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc27Q3V036 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc27Q3V036 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ccdc27Q3V036 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc27Q3V036 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc27Q3V036 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ccdc27Q3V036 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc27Q3V036 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ccdc27Q3V036 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc27Q3V036 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc27Q3V036 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc27Q3V036 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc27Q3V036 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc27Q3V036 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc27Q3V036 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc27Q3V036 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc27Q3V036 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc27Q3V036 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc27Q3V036 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.81■□□□□ 0.92
Ccdc27Q3V036 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc27Q3V036 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
Ccdc27Q3V036 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.81■□□□□ 0.92
Ccdc27Q3V036 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.81■□□□□ 0.92
Ccdc27Q3V036 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms