Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Gm5864-201ENSMUST00000202263 970 ntBASIC15.85■□□□□ 0.13
Rnf223Q3UV31 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rnf223Q3UV31 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf223Q3UV31 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf223Q3UV31 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf223Q3UV31 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Rnf223Q3UV31 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rnf223Q3UV31 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.84■□□□□ 0.13
Rnf223Q3UV31 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.84■□□□□ 0.13
Rnf223Q3UV31 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.84■□□□□ 0.13
Rnf223Q3UV31 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.84■□□□□ 0.13
Rnf223Q3UV31 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf223Q3UV31 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.84■□□□□ 0.13
Rnf223Q3UV31 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf223Q3UV31 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf223Q3UV31 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf223Q3UV31 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Rnf223Q3UV31 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf223Q3UV31 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rnf223Q3UV31 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf223Q3UV31 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf223Q3UV31 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Rnf223Q3UV31 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rnf223Q3UV31 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf223Q3UV31 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf223Q3UV31 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
Rnf223Q3UV31 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf223Q3UV31 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.83■□□□□ 0.12
Rnf223Q3UV31 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf223Q3UV31 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf223Q3UV31 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf223Q3UV31 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Rnf223Q3UV31 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf223Q3UV31 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf223Q3UV31 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Rnf223Q3UV31 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rnf223Q3UV31 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rnf223Q3UV31 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rnf223Q3UV31 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.82■□□□□ 0.12
Rnf223Q3UV31 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.82■□□□□ 0.12
Rnf223Q3UV31 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf223Q3UV31 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Gm13884-201ENSMUST00000118103 829 ntBASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Mir8098-201ENSMUST00000184011 137 ntBASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Gm28659-201ENSMUST00000188013 759 ntBASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf223Q3UV31 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms