Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf44Q3UHJ8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rnf44Q3UHJ8 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.82■□□□□ 0.12
Rnf44Q3UHJ8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf44Q3UHJ8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.82■□□□□ 0.12
Rnf44Q3UHJ8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf44Q3UHJ8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf44Q3UHJ8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rnf44Q3UHJ8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf44Q3UHJ8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Gm45328-201ENSMUST00000210942 917 ntBASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf44Q3UHJ8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.79■□□□□ 0.12
Rnf44Q3UHJ8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf44Q3UHJ8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Rnf44Q3UHJ8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf44Q3UHJ8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf44Q3UHJ8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf44Q3UHJ8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf44Q3UHJ8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf44Q3UHJ8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf44Q3UHJ8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf44Q3UHJ8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf44Q3UHJ8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf44Q3UHJ8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf44Q3UHJ8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rnf44Q3UHJ8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf44Q3UHJ8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.79■□□□□ 0.12
Rnf44Q3UHJ8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf44Q3UHJ8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf44Q3UHJ8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms