Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx27Q3UHD6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Snx27Q3UHD6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx27Q3UHD6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx27Q3UHD6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx27Q3UHD6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx27Q3UHD6 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.65■□□□□ 0.42
Snx27Q3UHD6 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.65■□□□□ 0.42
Snx27Q3UHD6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Snx27Q3UHD6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx27Q3UHD6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Snx27Q3UHD6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx27Q3UHD6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx27Q3UHD6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx27Q3UHD6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx27Q3UHD6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx27Q3UHD6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx27Q3UHD6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx27Q3UHD6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Snx27Q3UHD6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Snx27Q3UHD6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Snx27Q3UHD6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Snx27Q3UHD6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Snx27Q3UHD6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.63■□□□□ 0.41
Snx27Q3UHD6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Snx27Q3UHD6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Snx27Q3UHD6 Gm7506-201ENSMUST00000207758 815 ntBASIC17.63■□□□□ 0.41
Snx27Q3UHD6 Gm6296-201ENSMUST00000222599 943 ntBASIC17.63■□□□□ 0.41
Snx27Q3UHD6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.63■□□□□ 0.41
Snx27Q3UHD6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.63■□□□□ 0.41
Snx27Q3UHD6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Snx27Q3UHD6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx27Q3UHD6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx27Q3UHD6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Snx27Q3UHD6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Snx27Q3UHD6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snx27Q3UHD6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Snx27Q3UHD6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snx27Q3UHD6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Snx27Q3UHD6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snx27Q3UHD6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.62■□□□□ 0.41
Snx27Q3UHD6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snx27Q3UHD6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snx27Q3UHD6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snx27Q3UHD6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snx27Q3UHD6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Snx27Q3UHD6 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Snx27Q3UHD6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snx27Q3UHD6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snx27Q3UHD6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snx27Q3UHD6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snx27Q3UHD6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Snx27Q3UHD6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snx27Q3UHD6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snx27Q3UHD6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snx27Q3UHD6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.61■□□□□ 0.41
Snx27Q3UHD6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Snx27Q3UHD6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snx27Q3UHD6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Snx27Q3UHD6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.61■□□□□ 0.41
Snx27Q3UHD6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.61■□□□□ 0.41
Snx27Q3UHD6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.61■□□□□ 0.41
Snx27Q3UHD6 Gm6376-201ENSMUST00000209407 580 ntBASIC17.61■□□□□ 0.41
Snx27Q3UHD6 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.61■□□□□ 0.41
Snx27Q3UHD6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.61■□□□□ 0.41
Snx27Q3UHD6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Snx27Q3UHD6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snx27Q3UHD6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Snx27Q3UHD6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snx27Q3UHD6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Snx27Q3UHD6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Snx27Q3UHD6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snx27Q3UHD6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Snx27Q3UHD6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Snx27Q3UHD6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snx27Q3UHD6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Snx27Q3UHD6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.6■□□□□ 0.41
Snx27Q3UHD6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Snx27Q3UHD6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Snx27Q3UHD6 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms