Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.51□□□□□ -0.09
Rab42Q0PD08 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.51□□□□□ -0.09
Rab42Q0PD08 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.51□□□□□ -0.09
Rab42Q0PD08 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rab42Q0PD08 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Gm13401-201ENSMUST00000117074 291 ntBASIC14.5□□□□□ -0.09
Rab42Q0PD08 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Gm18025-201ENSMUST00000221733 862 ntBASIC14.5□□□□□ -0.09
Rab42Q0PD08 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.5□□□□□ -0.09
Rab42Q0PD08 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rab42Q0PD08 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab42Q0PD08 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.49□□□□□ -0.09
Rab42Q0PD08 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Gm6576-201ENSMUST00000169678 883 ntBASIC14.49□□□□□ -0.09
Rab42Q0PD08 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Gm29257-201ENSMUST00000186115 639 ntBASIC14.49□□□□□ -0.09
Rab42Q0PD08 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.49□□□□□ -0.09
Rab42Q0PD08 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.49□□□□□ -0.09
Rab42Q0PD08 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.49□□□□□ -0.09
Rab42Q0PD08 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Rab42Q0PD08 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rab42Q0PD08 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rab42Q0PD08 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab42Q0PD08 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rab42Q0PD08 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.48□□□□□ -0.09
Rab42Q0PD08 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rab42Q0PD08 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms