Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdx4Q07424 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cdx4Q07424 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx4Q07424 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cdx4Q07424 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cdx4Q07424 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cdx4Q07424 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx4Q07424 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx4Q07424 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx4Q07424 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx4Q07424 Gm25016-201ENSMUST00000158399 131 ntBASIC12.67□□□□□ -0.38
Cdx4Q07424 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx4Q07424 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.67□□□□□ -0.38
Cdx4Q07424 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx4Q07424 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Cdx4Q07424 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx4Q07424 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx4Q07424 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Cdx4Q07424 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cdx4Q07424 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.67□□□□□ -0.38
Cdx4Q07424 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cdx4Q07424 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx4Q07424 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx4Q07424 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdx4Q07424 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx4Q07424 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx4Q07424 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx4Q07424 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx4Q07424 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cdx4Q07424 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx4Q07424 Gm14859-201ENSMUST00000117752 357 ntBASIC12.66□□□□□ -0.38
Cdx4Q07424 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx4Q07424 Gm18958-201ENSMUST00000174258 762 ntBASIC12.66□□□□□ -0.38
Cdx4Q07424 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.66□□□□□ -0.38
Cdx4Q07424 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx4Q07424 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx4Q07424 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx4Q07424 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx4Q07424 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx4Q07424 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx4Q07424 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx4Q07424 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx4Q07424 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cdx4Q07424 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx4Q07424 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx4Q07424 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx4Q07424 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdx4Q07424 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.65□□□□□ -0.38
Cdx4Q07424 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdx4Q07424 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdx4Q07424 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdx4Q07424 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdx4Q07424 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdx4Q07424 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdx4Q07424 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdx4Q07424 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdx4Q07424 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdx4Q07424 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdx4Q07424 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cdx4Q07424 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdx4Q07424 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cdx4Q07424 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdx4Q07424 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cdx4Q07424 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdx4Q07424 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Cdx4Q07424 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdx4Q07424 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdx4Q07424 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cdx4Q07424 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdx4Q07424 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdx4Q07424 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cdx4Q07424 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdx4Q07424 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdx4Q07424 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdx4Q07424 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdx4Q07424 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Cdx4Q07424 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx4Q07424 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdx4Q07424 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx4Q07424 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx4Q07424 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Cdx4Q07424 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx4Q07424 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Cdx4Q07424 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdx4Q07424 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx4Q07424 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx4Q07424 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx4Q07424 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx4Q07424 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdx4Q07424 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdx4Q07424 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Cdx4Q07424 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx4Q07424 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
Cdx4Q07424 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.64□□□□□ -0.39
Cdx4Q07424 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.64□□□□□ -0.39
Cdx4Q07424 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.64□□□□□ -0.39
Cdx4Q07424 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdx4Q07424 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.64□□□□□ -0.39
Cdx4Q07424 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdx4Q07424 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms