Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Smn1P97801 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.08□□□□□ -0.16
Smn1P97801 Gm18666-201ENSMUST00000190039 958 ntBASIC14.08□□□□□ -0.16
Smn1P97801 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smn1P97801 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Smn1P97801 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smn1P97801 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smn1P97801 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smn1P97801 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smn1P97801 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smn1P97801 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smn1P97801 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Smn1P97801 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smn1P97801 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Smn1P97801 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smn1P97801 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smn1P97801 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.08□□□□□ -0.16
Smn1P97801 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smn1P97801 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smn1P97801 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smn1P97801 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smn1P97801 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smn1P97801 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smn1P97801 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Smn1P97801 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Smn1P97801 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smn1P97801 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Smn1P97801 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smn1P97801 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smn1P97801 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smn1P97801 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smn1P97801 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smn1P97801 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smn1P97801 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smn1P97801 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smn1P97801 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smn1P97801 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smn1P97801 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.07□□□□□ -0.16
Smn1P97801 Gm9731-201ENSMUST00000209480 747 ntBASIC14.07□□□□□ -0.16
Smn1P97801 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smn1P97801 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smn1P97801 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Smn1P97801 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Smn1P97801 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Smn1P97801 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smn1P97801 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smn1P97801 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smn1P97801 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smn1P97801 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smn1P97801 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.06□□□□□ -0.16
Smn1P97801 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smn1P97801 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smn1P97801 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smn1P97801 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.06□□□□□ -0.16
Smn1P97801 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smn1P97801 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smn1P97801 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Smn1P97801 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smn1P97801 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smn1P97801 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smn1P97801 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smn1P97801 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smn1P97801 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smn1P97801 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smn1P97801 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smn1P97801 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smn1P97801 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smn1P97801 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smn1P97801 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Smn1P97801 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smn1P97801 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smn1P97801 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smn1P97801 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smn1P97801 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smn1P97801 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smn1P97801 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smn1P97801 Gm12085-201ENSMUST00000119263 940 ntBASIC14.05□□□□□ -0.16
Smn1P97801 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.05□□□□□ -0.16
Smn1P97801 Gm18958-201ENSMUST00000174258 762 ntBASIC14.05□□□□□ -0.16
Smn1P97801 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smn1P97801 Gm20049-201ENSMUST00000219950 730 ntBASIC14.05□□□□□ -0.16
Smn1P97801 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smn1P97801 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smn1P97801 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.05□□□□□ -0.16
Smn1P97801 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Smn1P97801 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.05□□□□□ -0.16
Smn1P97801 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smn1P97801 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smn1P97801 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smn1P97801 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smn1P97801 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smn1P97801 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smn1P97801 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smn1P97801 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smn1P97801 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smn1P97801 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smn1P97801 Prob1-201ENSMUST00000097619 3021 ntBASIC14.04□□□□□ -0.16
Smn1P97801 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smn1P97801 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smn1P97801 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms