Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msx3P70354 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msx3P70354 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msx3P70354 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Msx3P70354 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.83■□□□□ 0.28
Msx3P70354 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msx3P70354 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msx3P70354 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Msx3P70354 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msx3P70354 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.83■□□□□ 0.28
Msx3P70354 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msx3P70354 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msx3P70354 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Msx3P70354 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Msx3P70354 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.83■□□□□ 0.28
Msx3P70354 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.82■□□□□ 0.28
Msx3P70354 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.82■□□□□ 0.28
Msx3P70354 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Msx3P70354 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Msx3P70354 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Msx3P70354 Gm15565-201ENSMUST00000118890 427 ntBASIC16.82■□□□□ 0.28
Msx3P70354 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Msx3P70354 Gm27389-201ENSMUST00000183622 195 ntBASIC16.82■□□□□ 0.28
Msx3P70354 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.82■□□□□ 0.28
Msx3P70354 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Msx3P70354 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Msx3P70354 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msx3P70354 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msx3P70354 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msx3P70354 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Msx3P70354 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msx3P70354 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msx3P70354 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msx3P70354 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.81■□□□□ 0.28
Msx3P70354 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Msx3P70354 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.81■□□□□ 0.28
Msx3P70354 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.81■□□□□ 0.28
Msx3P70354 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.81■□□□□ 0.28
Msx3P70354 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msx3P70354 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.81■□□□□ 0.28
Msx3P70354 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Msx3P70354 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msx3P70354 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msx3P70354 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Msx3P70354 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msx3P70354 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msx3P70354 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.81■□□□□ 0.28
Msx3P70354 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msx3P70354 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msx3P70354 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msx3P70354 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msx3P70354 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.81■□□□□ 0.28
Msx3P70354 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msx3P70354 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msx3P70354 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Msx3P70354 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Msx3P70354 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Msx3P70354 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
Msx3P70354 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msx3P70354 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msx3P70354 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msx3P70354 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msx3P70354 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msx3P70354 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msx3P70354 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Msx3P70354 Gm6433-201ENSMUST00000118634 875 ntBASIC16.8■□□□□ 0.28
Msx3P70354 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.8■□□□□ 0.28
Msx3P70354 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Msx3P70354 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Msx3P70354 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.8■□□□□ 0.28
Msx3P70354 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.8■□□□□ 0.28
Msx3P70354 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msx3P70354 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msx3P70354 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Msx3P70354 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msx3P70354 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Msx3P70354 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Msx3P70354 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Msx3P70354 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms