Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Cux2P70298 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Cux2P70298 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Cux2P70298 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.87
Cux2P70298 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
Cux2P70298 Gm15358-201ENSMUST00000119249 520 ntBASIC26.7■■□□□ 1.86
Cux2P70298 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC26.7■■□□□ 1.86
Cux2P70298 Gm11424-201ENSMUST00000121929 829 ntBASIC26.7■■□□□ 1.86
Cux2P70298 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC26.7■■□□□ 1.86
Cux2P70298 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC26.7■■□□□ 1.86
Cux2P70298 Gm18489-201ENSMUST00000172565 551 ntBASIC26.7■■□□□ 1.86
Cux2P70298 Gm5628-201ENSMUST00000222318 1049 ntBASIC26.7■■□□□ 1.86
Cux2P70298 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Cux2P70298 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Cux2P70298 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Cux2P70298 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Cux2P70298 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Cux2P70298 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Cux2P70298 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cux2P70298 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cux2P70298 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cux2P70298 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cux2P70298 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cux2P70298 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC26.69■■□□□ 1.86
Cux2P70298 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cux2P70298 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Cux2P70298 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC26.69■■□□□ 1.86
Cux2P70298 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cux2P70298 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cux2P70298 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cux2P70298 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cux2P70298 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Cux2P70298 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cux2P70298 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cux2P70298 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC26.68■■□□□ 1.86
Cux2P70298 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC26.68■■□□□ 1.86
Cux2P70298 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cux2P70298 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cux2P70298 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Cux2P70298 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cux2P70298 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Cux2P70298 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC26.67■■□□□ 1.86
Cux2P70298 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC26.67■■□□□ 1.86
Cux2P70298 Mir449b-201ENSMUST00000104833 80 ntBASIC26.67■■□□□ 1.86
Cux2P70298 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cux2P70298 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC26.67■■□□□ 1.86
Cux2P70298 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cux2P70298 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Cux2P70298 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cux2P70298 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
Cux2P70298 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC26.67■■□□□ 1.86
Cux2P70298 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cux2P70298 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Cux2P70298 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cux2P70298 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cux2P70298 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
Cux2P70298 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Cux2P70298 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Cux2P70298 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Cux2P70298 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC26.66■■□□□ 1.86
Cux2P70298 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC26.66■■□□□ 1.86
Cux2P70298 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC26.66■■□□□ 1.86
Cux2P70298 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Cux2P70298 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cux2P70298 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Cux2P70298 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Cux2P70298 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Cux2P70298 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cux2P70298 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cux2P70298 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC26.66■■□□□ 1.86
Cux2P70298 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
Cux2P70298 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC26.65■■□□□ 1.86
Cux2P70298 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC26.65■■□□□ 1.86
Cux2P70298 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Cux2P70298 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cux2P70298 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cux2P70298 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cux2P70298 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cux2P70298 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cux2P70298 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC26.65■■□□□ 1.86
Cux2P70298 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Cux2P70298 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC26.65■■□□□ 1.86
Cux2P70298 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Cux2P70298 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Cux2P70298 Mir6977-201ENSMUST00000184960 64 ntBASIC26.65■■□□□ 1.86
Cux2P70298 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Cux2P70298 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC26.64■■□□□ 1.86
Cux2P70298 Gm11620-201ENSMUST00000118770 1845 ntBASIC26.64■■□□□ 1.86
Cux2P70298 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cux2P70298 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Cux2P70298 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Cux2P70298 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Cux2P70298 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Cux2P70298 Rprl2-201ENSMUST00000157150 290 ntBASIC26.64■■□□□ 1.85
Cux2P70298 Gm27437-201ENSMUST00000183429 107 ntBASIC26.64■■□□□ 1.85
Cux2P70298 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
Cux2P70298 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Cux2P70298 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Cux2P70298 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Cux2P70298 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms