Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b6P59708 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b6P59708 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b6P59708 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b6P59708 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b6P59708 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b6P59708 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.55□□□□□ -0.08
Sf3b6P59708 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Sf3b6P59708 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sf3b6P59708 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Sf3b6P59708 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Sf3b6P59708 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.55□□□□□ -0.08
Sf3b6P59708 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b6P59708 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b6P59708 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b6P59708 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sf3b6P59708 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b6P59708 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b6P59708 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b6P59708 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.55□□□□□ -0.08
Sf3b6P59708 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b6P59708 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b6P59708 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b6P59708 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sf3b6P59708 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b6P59708 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b6P59708 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b6P59708 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Sf3b6P59708 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.54□□□□□ -0.08
Sf3b6P59708 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b6P59708 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b6P59708 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.54□□□□□ -0.08
Sf3b6P59708 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b6P59708 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.54□□□□□ -0.08
Sf3b6P59708 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Sf3b6P59708 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b6P59708 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b6P59708 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b6P59708 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b6P59708 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b6P59708 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b6P59708 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b6P59708 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b6P59708 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b6P59708 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b6P59708 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b6P59708 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b6P59708 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sf3b6P59708 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.54□□□□□ -0.08
Sf3b6P59708 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b6P59708 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sf3b6P59708 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 App-207ENSMUST00000227737 2827 ntBASIC14.53□□□□□ -0.08
Sf3b6P59708 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.53□□□□□ -0.08
Sf3b6P59708 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.53□□□□□ -0.08
Sf3b6P59708 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.53□□□□□ -0.08
Sf3b6P59708 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sf3b6P59708 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.53□□□□□ -0.08
Sf3b6P59708 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.53□□□□□ -0.08
Sf3b6P59708 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sf3b6P59708 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.52□□□□□ -0.08
Sf3b6P59708 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.52□□□□□ -0.08
Sf3b6P59708 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b6P59708 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b6P59708 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Sf3b6P59708 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.52□□□□□ -0.08
Sf3b6P59708 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b6P59708 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Sf3b6P59708 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b6P59708 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b6P59708 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b6P59708 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sf3b6P59708 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.52□□□□□ -0.09
Sf3b6P59708 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.52□□□□□ -0.09
Sf3b6P59708 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
Sf3b6P59708 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms