Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm2P58774 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm2P58774 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm2P58774 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.85■□□□□ 0.61
Tpm2P58774 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm2P58774 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm2P58774 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm2P58774 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm2P58774 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
Tpm2P58774 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm2P58774 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm2P58774 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm2P58774 Gm11249-201ENSMUST00000117071 859 ntBASIC18.85■□□□□ 0.61
Tpm2P58774 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.85■□□□□ 0.61
Tpm2P58774 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm2P58774 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm2P58774 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Tpm2P58774 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm2P58774 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Tpm2P58774 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Tpm2P58774 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.84■□□□□ 0.61
Tpm2P58774 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm2P58774 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm2P58774 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm2P58774 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm2P58774 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm2P58774 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm2P58774 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm2P58774 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm2P58774 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm2P58774 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm2P58774 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.84■□□□□ 0.61
Tpm2P58774 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm2P58774 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm2P58774 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm2P58774 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Tpm2P58774 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm2P58774 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm2P58774 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
Tpm2P58774 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tpm2P58774 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tpm2P58774 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.83■□□□□ 0.6
Tpm2P58774 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm2P58774 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.83■□□□□ 0.6
Tpm2P58774 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.83■□□□□ 0.6
Tpm2P58774 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm2P58774 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm2P58774 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm2P58774 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm2P58774 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.83■□□□□ 0.6
Tpm2P58774 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm2P58774 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm2P58774 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tpm2P58774 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Tpm2P58774 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm2P58774 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.82■□□□□ 0.6
Tpm2P58774 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm2P58774 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.82■□□□□ 0.6
Tpm2P58774 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Tpm2P58774 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm2P58774 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm2P58774 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
Tpm2P58774 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm2P58774 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Tpm2P58774 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.82■□□□□ 0.6
Tpm2P58774 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm2P58774 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tpm2P58774 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm2P58774 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm2P58774 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm2P58774 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm2P58774 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm2P58774 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm2P58774 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Tpm2P58774 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm2P58774 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tpm2P58774 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tpm2P58774 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm2P58774 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm2P58774 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.82■□□□□ 0.6
Tpm2P58774 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm2P58774 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm2P58774 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tpm2P58774 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm2P58774 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm2P58774 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm2P58774 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm2P58774 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm2P58774 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm2P58774 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm2P58774 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.81■□□□□ 0.6
Tpm2P58774 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm2P58774 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm2P58774 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm2P58774 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm2P58774 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm2P58774 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm2P58774 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm2P58774 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tpm2P58774 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 112.6 ms