Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Tm6sf1P58749 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf1P58749 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf1P58749 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf1P58749 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf1P58749 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Tm6sf1P58749 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf1P58749 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf1P58749 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf1P58749 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf1P58749 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf1P58749 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf1P58749 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf1P58749 Gm27742-201ENSMUST00000184667 60 ntBASIC20.09■□□□□ 0.81
Tm6sf1P58749 Gm33142-201ENSMUST00000193913 867 ntBASIC20.09■□□□□ 0.81
Tm6sf1P58749 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Tm6sf1P58749 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf1P58749 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Tm6sf1P58749 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf1P58749 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf1P58749 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf1P58749 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf1P58749 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm6sf1P58749 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tm6sf1P58749 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tm6sf1P58749 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Tm6sf1P58749 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tm6sf1P58749 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tm6sf1P58749 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tm6sf1P58749 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.08■□□□□ 0.81
Tm6sf1P58749 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tm6sf1P58749 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tm6sf1P58749 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.08■□□□□ 0.81
Tm6sf1P58749 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.08■□□□□ 0.81
Tm6sf1P58749 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Tm6sf1P58749 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Tm6sf1P58749 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tm6sf1P58749 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC20.07■□□□□ 0.8
Tm6sf1P58749 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tm6sf1P58749 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tm6sf1P58749 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tm6sf1P58749 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tm6sf1P58749 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tm6sf1P58749 Gm27704-201ENSMUST00000185094 107 ntBASIC20.07■□□□□ 0.8
Tm6sf1P58749 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tm6sf1P58749 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Tm6sf1P58749 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC20.07■□□□□ 0.8
Tm6sf1P58749 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tm6sf1P58749 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Tm6sf1P58749 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tm6sf1P58749 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf1P58749 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf1P58749 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Tm6sf1P58749 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf1P58749 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf1P58749 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf1P58749 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf1P58749 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf1P58749 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf1P58749 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf1P58749 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Tm6sf1P58749 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf1P58749 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Tm6sf1P58749 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf1P58749 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf1P58749 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf1P58749 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf1P58749 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf1P58749 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf1P58749 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf1P58749 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf1P58749 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Tm6sf1P58749 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tm6sf1P58749 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tm6sf1P58749 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tm6sf1P58749 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tm6sf1P58749 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Tm6sf1P58749 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tm6sf1P58749 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tm6sf1P58749 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tm6sf1P58749 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tm6sf1P58749 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tm6sf1P58749 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tm6sf1P58749 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.04■□□□□ 0.8
Tm6sf1P58749 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tm6sf1P58749 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC20.04■□□□□ 0.8
Tm6sf1P58749 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tm6sf1P58749 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tm6sf1P58749 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tm6sf1P58749 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tm6sf1P58749 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tm6sf1P58749 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tm6sf1P58749 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Tm6sf1P58749 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.04■□□□□ 0.8
Tm6sf1P58749 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.04■□□□□ 0.8
Tm6sf1P58749 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tm6sf1P58749 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tm6sf1P58749 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms