Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.43■□□□□ 0.22
SmoP56726 Gm27741-201ENSMUST00000185060 237 ntBASIC16.43■□□□□ 0.22
SmoP56726 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.43■□□□□ 0.22
SmoP56726 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SmoP56726 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
SmoP56726 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SmoP56726 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SmoP56726 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SmoP56726 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SmoP56726 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SmoP56726 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SmoP56726 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SmoP56726 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.43■□□□□ 0.22
SmoP56726 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SmoP56726 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SmoP56726 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SmoP56726 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SmoP56726 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.42■□□□□ 0.22
SmoP56726 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SmoP56726 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SmoP56726 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SmoP56726 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.42■□□□□ 0.22
SmoP56726 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.42■□□□□ 0.22
SmoP56726 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.42■□□□□ 0.22
SmoP56726 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.42■□□□□ 0.22
SmoP56726 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SmoP56726 Gm44454-201ENSMUST00000198541 138 ntBASIC16.42■□□□□ 0.22
SmoP56726 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.42■□□□□ 0.22
SmoP56726 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.42■□□□□ 0.22
SmoP56726 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SmoP56726 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SmoP56726 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SmoP56726 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SmoP56726 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SmoP56726 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SmoP56726 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SmoP56726 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.42■□□□□ 0.22
SmoP56726 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SmoP56726 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SmoP56726 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
SmoP56726 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SmoP56726 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SmoP56726 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SmoP56726 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SmoP56726 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.41■□□□□ 0.22
SmoP56726 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SmoP56726 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SmoP56726 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SmoP56726 Gm7153-201ENSMUST00000117092 455 ntBASIC16.41■□□□□ 0.22
SmoP56726 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.41■□□□□ 0.22
SmoP56726 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.41■□□□□ 0.22
SmoP56726 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SmoP56726 Birc2-201ENSMUST00000054878 378 ntBASIC16.41■□□□□ 0.22
SmoP56726 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SmoP56726 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SmoP56726 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SmoP56726 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.41■□□□□ 0.22
SmoP56726 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SmoP56726 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SmoP56726 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SmoP56726 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.41■□□□□ 0.22
SmoP56726 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SmoP56726 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SmoP56726 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SmoP56726 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SmoP56726 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SmoP56726 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SmoP56726 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SmoP56726 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SmoP56726 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SmoP56726 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SmoP56726 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SmoP56726 Gm24589-201ENSMUST00000116692 94 ntBASIC16.4■□□□□ 0.22
SmoP56726 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SmoP56726 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SmoP56726 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SmoP56726 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.4■□□□□ 0.22
SmoP56726 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SmoP56726 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SmoP56726 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SmoP56726 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SmoP56726 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SmoP56726 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SmoP56726 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SmoP56726 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SmoP56726 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
SmoP56726 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SmoP56726 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SmoP56726 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SmoP56726 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SmoP56726 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SmoP56726 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SmoP56726 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SmoP56726 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SmoP56726 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SmoP56726 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SmoP56726 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SmoP56726 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SmoP56726 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SmoP56726 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms