Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cks2P56390 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cks2P56390 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cks2P56390 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cks2P56390 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cks2P56390 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks2P56390 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks2P56390 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks2P56390 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cks2P56390 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks2P56390 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks2P56390 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks2P56390 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Cks2P56390 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Cks2P56390 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cks2P56390 Gm5643-201ENSMUST00000117081 966 ntBASIC13.69□□□□□ -0.22
Cks2P56390 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.69□□□□□ -0.22
Cks2P56390 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.69□□□□□ -0.22
Cks2P56390 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.69□□□□□ -0.22
Cks2P56390 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cks2P56390 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cks2P56390 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cks2P56390 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cks2P56390 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks2P56390 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.69□□□□□ -0.22
Cks2P56390 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cks2P56390 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cks2P56390 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Cks2P56390 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.68□□□□□ -0.22
Cks2P56390 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cks2P56390 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cks2P56390 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.67□□□□□ -0.22
Cks2P56390 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.67□□□□□ -0.22
Cks2P56390 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.67□□□□□ -0.22
Cks2P56390 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cks2P56390 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.67□□□□□ -0.22
Cks2P56390 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cks2P56390 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cks2P56390 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.67□□□□□ -0.22
Cks2P56390 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Cks2P56390 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.67□□□□□ -0.22
Cks2P56390 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cks2P56390 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks2P56390 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cks2P56390 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cks2P56390 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.66□□□□□ -0.22
Cks2P56390 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.66□□□□□ -0.22
Cks2P56390 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks2P56390 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks2P56390 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks2P56390 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cks2P56390 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms