Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
NcanP55066 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NcanP55066 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NcanP55066 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NcanP55066 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NcanP55066 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NcanP55066 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.22■□□□□ 0.35
NcanP55066 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.22■□□□□ 0.35
NcanP55066 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.22■□□□□ 0.35
NcanP55066 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NcanP55066 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NcanP55066 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NcanP55066 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NcanP55066 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NcanP55066 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NcanP55066 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NcanP55066 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NcanP55066 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NcanP55066 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NcanP55066 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NcanP55066 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.21■□□□□ 0.35
NcanP55066 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NcanP55066 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NcanP55066 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.21■□□□□ 0.35
NcanP55066 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NcanP55066 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NcanP55066 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NcanP55066 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NcanP55066 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NcanP55066 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.21■□□□□ 0.35
NcanP55066 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NcanP55066 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NcanP55066 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
NcanP55066 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NcanP55066 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NcanP55066 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NcanP55066 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NcanP55066 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NcanP55066 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.21■□□□□ 0.34
NcanP55066 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NcanP55066 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NcanP55066 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NcanP55066 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NcanP55066 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NcanP55066 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NcanP55066 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.2■□□□□ 0.34
NcanP55066 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NcanP55066 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NcanP55066 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.2■□□□□ 0.34
NcanP55066 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.2■□□□□ 0.34
NcanP55066 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
NcanP55066 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NcanP55066 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NcanP55066 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NcanP55066 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.2■□□□□ 0.34
NcanP55066 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NcanP55066 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NcanP55066 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NcanP55066 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NcanP55066 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NcanP55066 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NcanP55066 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NcanP55066 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NcanP55066 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NcanP55066 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.19■□□□□ 0.34
NcanP55066 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NcanP55066 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NcanP55066 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NcanP55066 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NcanP55066 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NcanP55066 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NcanP55066 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NcanP55066 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NcanP55066 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.19■□□□□ 0.34
NcanP55066 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NcanP55066 Gm25948-201ENSMUST00000175334 112 ntBASIC17.19■□□□□ 0.34
NcanP55066 Gm5866-201ENSMUST00000177881 973 ntBASIC17.19■□□□□ 0.34
NcanP55066 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
NcanP55066 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NcanP55066 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NcanP55066 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NcanP55066 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NcanP55066 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NcanP55066 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NcanP55066 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NcanP55066 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NcanP55066 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NcanP55066 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NcanP55066 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NcanP55066 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NcanP55066 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NcanP55066 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NcanP55066 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.18■□□□□ 0.34
NcanP55066 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NcanP55066 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NcanP55066 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.18■□□□□ 0.34
NcanP55066 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NcanP55066 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.18■□□□□ 0.34
NcanP55066 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NcanP55066 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms