Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
NrlP54846 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NrlP54846 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NrlP54846 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
NrlP54846 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NrlP54846 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.4■□□□□ 0.38
NrlP54846 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NrlP54846 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
NrlP54846 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NrlP54846 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NrlP54846 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.39■□□□□ 0.38
NrlP54846 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NrlP54846 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NrlP54846 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NrlP54846 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NrlP54846 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NrlP54846 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NrlP54846 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NrlP54846 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.39■□□□□ 0.37
NrlP54846 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NrlP54846 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
NrlP54846 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NrlP54846 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NrlP54846 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NrlP54846 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NrlP54846 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NrlP54846 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NrlP54846 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NrlP54846 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NrlP54846 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.38■□□□□ 0.37
NrlP54846 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.38■□□□□ 0.37
NrlP54846 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
NrlP54846 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NrlP54846 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.38■□□□□ 0.37
NrlP54846 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NrlP54846 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NrlP54846 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NrlP54846 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NrlP54846 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NrlP54846 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NrlP54846 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NrlP54846 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NrlP54846 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.37■□□□□ 0.37
NrlP54846 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NrlP54846 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NrlP54846 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NrlP54846 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NrlP54846 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NrlP54846 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NrlP54846 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NrlP54846 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NrlP54846 Gm1401-201ENSMUST00000122048 772 ntBASIC17.37■□□□□ 0.37
NrlP54846 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.37■□□□□ 0.37
NrlP54846 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.37■□□□□ 0.37
NrlP54846 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.37■□□□□ 0.37
NrlP54846 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.37■□□□□ 0.37
NrlP54846 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.37■□□□□ 0.37
NrlP54846 Gm44357-201ENSMUST00000195897 142 ntBASIC17.37■□□□□ 0.37
NrlP54846 Gm19658-201ENSMUST00000196231 138 ntBASIC17.37■□□□□ 0.37
NrlP54846 Gm44367-201ENSMUST00000196836 138 ntBASIC17.37■□□□□ 0.37
NrlP54846 Gm44350-201ENSMUST00000197197 138 ntBASIC17.37■□□□□ 0.37
NrlP54846 Gm44390-201ENSMUST00000197533 144 ntBASIC17.37■□□□□ 0.37
NrlP54846 Gm44313-201ENSMUST00000198018 138 ntBASIC17.37■□□□□ 0.37
NrlP54846 Gm44486-201ENSMUST00000198508 138 ntBASIC17.37■□□□□ 0.37
NrlP54846 Gm44314-201ENSMUST00000199263 138 ntBASIC17.37■□□□□ 0.37
NrlP54846 Gm44394-201ENSMUST00000199558 138 ntBASIC17.37■□□□□ 0.37
NrlP54846 Gm44484-201ENSMUST00000199873 138 ntBASIC17.37■□□□□ 0.37
NrlP54846 Gm44466-201ENSMUST00000200264 138 ntBASIC17.37■□□□□ 0.37
NrlP54846 Gm44359-201ENSMUST00000200671 138 ntBASIC17.37■□□□□ 0.37
NrlP54846 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.37■□□□□ 0.37
NrlP54846 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NrlP54846 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NrlP54846 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NrlP54846 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.37■□□□□ 0.37
NrlP54846 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NrlP54846 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
NrlP54846 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NrlP54846 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NrlP54846 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NrlP54846 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NrlP54846 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NrlP54846 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NrlP54846 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.36■□□□□ 0.37
NrlP54846 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NrlP54846 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NrlP54846 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NrlP54846 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NrlP54846 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NrlP54846 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NrlP54846 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NrlP54846 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.36■□□□□ 0.37
NrlP54846 Mir5131-201ENSMUST00000175426 93 ntBASIC17.36■□□□□ 0.37
NrlP54846 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NrlP54846 Gm37935-201ENSMUST00000192012 982 ntBASIC17.36■□□□□ 0.37
NrlP54846 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NrlP54846 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NrlP54846 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NrlP54846 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
NrlP54846 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NrlP54846 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms