Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.61■□□□□ 0.25
Ddx6P54823 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ddx6P54823 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx6P54823 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx6P54823 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx6P54823 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx6P54823 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx6P54823 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx6P54823 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx6P54823 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx6P54823 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx6P54823 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.6■□□□□ 0.25
Ddx6P54823 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx6P54823 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ddx6P54823 Gm7230-201ENSMUST00000173026 815 ntBASIC16.6■□□□□ 0.25
Ddx6P54823 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx6P54823 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx6P54823 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx6P54823 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.6■□□□□ 0.25
Ddx6P54823 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx6P54823 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx6P54823 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx6P54823 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ddx6P54823 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.6■□□□□ 0.25
Ddx6P54823 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx6P54823 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx6P54823 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx6P54823 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx6P54823 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx6P54823 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx6P54823 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx6P54823 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ddx6P54823 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ddx6P54823 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx6P54823 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Ddx6P54823 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx6P54823 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx6P54823 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.59■□□□□ 0.25
Ddx6P54823 Gm4459-201ENSMUST00000118750 468 ntBASIC16.59■□□□□ 0.25
Ddx6P54823 Gm13418-201ENSMUST00000119097 944 ntBASIC16.59■□□□□ 0.25
Ddx6P54823 Gm12350-201ENSMUST00000121208 462 ntBASIC16.59■□□□□ 0.25
Ddx6P54823 Gm1401-201ENSMUST00000122048 772 ntBASIC16.59■□□□□ 0.25
Ddx6P54823 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.59■□□□□ 0.25
Ddx6P54823 Gm8655-201ENSMUST00000221159 852 ntBASIC16.59■□□□□ 0.25
Ddx6P54823 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.59■□□□□ 0.25
Ddx6P54823 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx6P54823 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx6P54823 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx6P54823 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx6P54823 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ddx6P54823 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.59■□□□□ 0.25
Ddx6P54823 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx6P54823 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ddx6P54823 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Ddx6P54823 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx6P54823 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx6P54823 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx6P54823 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx6P54823 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx6P54823 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ddx6P54823 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ddx6P54823 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx6P54823 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx6P54823 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ddx6P54823 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
Ddx6P54823 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx6P54823 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.58■□□□□ 0.24
Ddx6P54823 Mir6404-201ENSMUST00000183699 94 ntBASIC16.58■□□□□ 0.24
Ddx6P54823 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.58■□□□□ 0.24
Ddx6P54823 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx6P54823 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx6P54823 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx6P54823 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx6P54823 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.58■□□□□ 0.24
Ddx6P54823 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx6P54823 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx6P54823 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx6P54823 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx6P54823 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx6P54823 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx6P54823 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx6P54823 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ddx6P54823 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx6P54823 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx6P54823 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx6P54823 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ddx6P54823 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx6P54823 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx6P54823 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx6P54823 Gm8097-201ENSMUST00000117903 829 ntBASIC16.57■□□□□ 0.24
Ddx6P54823 Mir5126-201ENSMUST00000175513 77 ntBASIC16.57■□□□□ 0.24
Ddx6P54823 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.57■□□□□ 0.24
Ddx6P54823 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.57■□□□□ 0.24
Ddx6P54823 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx6P54823 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx6P54823 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ddx6P54823 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx6P54823 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx6P54823 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ddx6P54823 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms