Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nub1P54729 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nub1P54729 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nub1P54729 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nub1P54729 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.62■□□□□ 0.41
Nub1P54729 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nub1P54729 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Nub1P54729 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.62■□□□□ 0.41
Nub1P54729 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Nub1P54729 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nub1P54729 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nub1P54729 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Nub1P54729 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nub1P54729 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.62■□□□□ 0.41
Nub1P54729 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nub1P54729 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nub1P54729 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nub1P54729 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nub1P54729 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nub1P54729 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.61■□□□□ 0.41
Nub1P54729 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.61■□□□□ 0.41
Nub1P54729 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nub1P54729 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nub1P54729 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nub1P54729 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nub1P54729 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nub1P54729 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nub1P54729 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nub1P54729 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Nub1P54729 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nub1P54729 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.61■□□□□ 0.41
Nub1P54729 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.61■□□□□ 0.41
Nub1P54729 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.61■□□□□ 0.41
Nub1P54729 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Nub1P54729 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Nub1P54729 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nub1P54729 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nub1P54729 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nub1P54729 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nub1P54729 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nub1P54729 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Nub1P54729 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nub1P54729 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nub1P54729 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nub1P54729 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nub1P54729 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Nub1P54729 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nub1P54729 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nub1P54729 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nub1P54729 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Nub1P54729 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nub1P54729 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nub1P54729 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Nub1P54729 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nub1P54729 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nub1P54729 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Nub1P54729 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nub1P54729 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nub1P54729 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nub1P54729 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nub1P54729 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nub1P54729 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nub1P54729 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nub1P54729 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Nub1P54729 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.59■□□□□ 0.41
Nub1P54729 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.59■□□□□ 0.41
Nub1P54729 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nub1P54729 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Nub1P54729 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nub1P54729 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nub1P54729 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nub1P54729 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nub1P54729 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nub1P54729 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nub1P54729 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nub1P54729 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Nub1P54729 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Nub1P54729 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nub1P54729 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nub1P54729 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Nub1P54729 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Nub1P54729 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Nub1P54729 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nub1P54729 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nub1P54729 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
Nub1P54729 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Nub1P54729 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nub1P54729 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nub1P54729 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nub1P54729 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.58■□□□□ 0.41
Nub1P54729 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nub1P54729 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nub1P54729 Gm25016-201ENSMUST00000158399 131 ntBASIC17.58■□□□□ 0.4
Nub1P54729 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.58■□□□□ 0.4
Nub1P54729 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nub1P54729 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Nub1P54729 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Nub1P54729 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Nub1P54729 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nub1P54729 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms