Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx3P50481 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.57■□□□□ 0.24
Lhx3P50481 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Lhx3P50481 Gm12895-201ENSMUST00000122214 226 ntBASIC16.57■□□□□ 0.24
Lhx3P50481 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.57■□□□□ 0.24
Lhx3P50481 Rprl3-201ENSMUST00000157400 290 ntBASIC16.57■□□□□ 0.24
Lhx3P50481 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx3P50481 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx3P50481 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Lhx3P50481 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx3P50481 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.57■□□□□ 0.24
Lhx3P50481 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
Lhx3P50481 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx3P50481 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Lhx3P50481 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx3P50481 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx3P50481 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx3P50481 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Lhx3P50481 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx3P50481 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx3P50481 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx3P50481 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.56■□□□□ 0.24
Lhx3P50481 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Lhx3P50481 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.56■□□□□ 0.24
Lhx3P50481 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx3P50481 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Lhx3P50481 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Lhx3P50481 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Lhx3P50481 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Lhx3P50481 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.56■□□□□ 0.24
Lhx3P50481 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx3P50481 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx3P50481 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx3P50481 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx3P50481 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx3P50481 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx3P50481 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Lhx3P50481 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx3P50481 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx3P50481 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx3P50481 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.56■□□□□ 0.24
Lhx3P50481 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx3P50481 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx3P50481 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx3P50481 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx3P50481 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx3P50481 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx3P50481 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx3P50481 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx3P50481 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Lhx3P50481 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx3P50481 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx3P50481 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx3P50481 Gm15372-201ENSMUST00000120729 834 ntBASIC16.55■□□□□ 0.24
Lhx3P50481 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.55■□□□□ 0.24
Lhx3P50481 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.55■□□□□ 0.24
Lhx3P50481 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx3P50481 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Lhx3P50481 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx3P50481 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx3P50481 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.55■□□□□ 0.24
Lhx3P50481 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx3P50481 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx3P50481 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Lhx3P50481 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.54■□□□□ 0.24
Lhx3P50481 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Lhx3P50481 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.54■□□□□ 0.24
Lhx3P50481 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.54■□□□□ 0.24
Lhx3P50481 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.54■□□□□ 0.24
Lhx3P50481 Gm17971-201ENSMUST00000190239 806 ntBASIC16.54■□□□□ 0.24
Lhx3P50481 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.54■□□□□ 0.24
Lhx3P50481 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Lhx3P50481 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx3P50481 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx3P50481 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx3P50481 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx3P50481 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx3P50481 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Lhx3P50481 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms