Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-1P50220 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkx2-1P50220 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-1P50220 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-1P50220 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.62□□□□□ -0.23
Nkx2-1P50220 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.62□□□□□ -0.23
Nkx2-1P50220 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-1P50220 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-1P50220 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-1P50220 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-1P50220 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-1P50220 Gm12441-201ENSMUST00000121806 588 ntBASIC13.62□□□□□ -0.23
Nkx2-1P50220 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.62□□□□□ -0.23
Nkx2-1P50220 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-1P50220 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-1P50220 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-1P50220 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-1P50220 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.62□□□□□ -0.23
Nkx2-1P50220 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-1P50220 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-1P50220 Dio3-201ENSMUST00000097228 1449 ntBASIC13.62□□□□□ -0.23
Nkx2-1P50220 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-1P50220 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-1P50220 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-1P50220 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-1P50220 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.62□□□□□ -0.23
Nkx2-1P50220 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-1P50220 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.61□□□□□ -0.23
Nkx2-1P50220 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.61□□□□□ -0.23
Nkx2-1P50220 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.61□□□□□ -0.23
Nkx2-1P50220 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx2-1P50220 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nkx2-1P50220 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-1P50220 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.6□□□□□ -0.23
Nkx2-1P50220 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkx2-1P50220 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-1P50220 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-1P50220 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-1P50220 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.6□□□□□ -0.23
Nkx2-1P50220 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.6□□□□□ -0.23
Nkx2-1P50220 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.6□□□□□ -0.23
Nkx2-1P50220 Gm4974-201ENSMUST00000209974 875 ntBASIC13.6□□□□□ -0.23
Nkx2-1P50220 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-1P50220 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-1P50220 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-1P50220 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-1P50220 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx2-1P50220 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-1P50220 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-1P50220 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx2-1P50220 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms