Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc3P49135 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.42■□□□□ 0.7
Ercc3P49135 Olfr129-201ENSMUST00000122318 993 ntBASIC19.42■□□□□ 0.7
Ercc3P49135 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc3P49135 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Ercc3P49135 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc3P49135 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc3P49135 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc3P49135 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
Ercc3P49135 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc3P49135 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc3P49135 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc3P49135 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc3P49135 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc3P49135 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc3P49135 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc3P49135 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.41■□□□□ 0.7
Ercc3P49135 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc3P49135 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc3P49135 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.41■□□□□ 0.7
Ercc3P49135 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.41■□□□□ 0.7
Ercc3P49135 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc3P49135 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc3P49135 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc3P49135 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Ercc3P49135 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ercc3P49135 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc3P49135 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc3P49135 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc3P49135 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc3P49135 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc3P49135 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc3P49135 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ercc3P49135 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc3P49135 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc3P49135 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc3P49135 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc3P49135 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc3P49135 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc3P49135 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc3P49135 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc3P49135 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc3P49135 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc3P49135 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc3P49135 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ercc3P49135 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.4■□□□□ 0.7
Ercc3P49135 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc3P49135 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc3P49135 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.4■□□□□ 0.7
Ercc3P49135 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ercc3P49135 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc3P49135 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ercc3P49135 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ercc3P49135 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ercc3P49135 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ercc3P49135 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
Ercc3P49135 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ercc3P49135 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ercc3P49135 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ercc3P49135 Gm13216-201ENSMUST00000117145 591 ntBASIC19.39■□□□□ 0.69
Ercc3P49135 Gm15794-201ENSMUST00000120182 631 ntBASIC19.39■□□□□ 0.69
Ercc3P49135 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.39■□□□□ 0.69
Ercc3P49135 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ercc3P49135 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ercc3P49135 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ercc3P49135 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ercc3P49135 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ercc3P49135 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ercc3P49135 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ercc3P49135 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
Ercc3P49135 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ercc3P49135 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ercc3P49135 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.38■□□□□ 0.69
Ercc3P49135 Gm14859-201ENSMUST00000117752 357 ntBASIC19.38■□□□□ 0.69
Ercc3P49135 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ercc3P49135 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ercc3P49135 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ercc3P49135 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
Ercc3P49135 Ank2-226ENSMUST00000189368 339 ntBASIC19.38■□□□□ 0.69
Ercc3P49135 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.38■□□□□ 0.69
Ercc3P49135 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ercc3P49135 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ercc3P49135 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ercc3P49135 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ercc3P49135 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ercc3P49135 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ercc3P49135 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ercc3P49135 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ercc3P49135 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc3P49135 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ercc3P49135 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.37■□□□□ 0.69
Ercc3P49135 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.37■□□□□ 0.69
Ercc3P49135 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ercc3P49135 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc3P49135 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc3P49135 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc3P49135 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Ercc3P49135 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc3P49135 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ercc3P49135 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms