Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4bP46467 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.62■□□□□ 0.25
Vps4bP46467 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4bP46467 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.62■□□□□ 0.25
Vps4bP46467 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4bP46467 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4bP46467 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4bP46467 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4bP46467 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4bP46467 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.62■□□□□ 0.25
Vps4bP46467 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4bP46467 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4bP46467 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4bP46467 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vps4bP46467 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Vps4bP46467 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.62■□□□□ 0.25
Vps4bP46467 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4bP46467 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4bP46467 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.61■□□□□ 0.25
Vps4bP46467 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4bP46467 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4bP46467 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Vps4bP46467 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
Vps4bP46467 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4bP46467 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4bP46467 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.61■□□□□ 0.25
Vps4bP46467 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Vps4bP46467 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.61■□□□□ 0.25
Vps4bP46467 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4bP46467 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4bP46467 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Vps4bP46467 Gm13474-201ENSMUST00000122466 815 ntBASIC16.61■□□□□ 0.25
Vps4bP46467 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.61■□□□□ 0.25
Vps4bP46467 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Vps4bP46467 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4bP46467 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.61■□□□□ 0.25
Vps4bP46467 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4bP46467 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4bP46467 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4bP46467 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.61■□□□□ 0.25
Vps4bP46467 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4bP46467 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4bP46467 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4bP46467 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Vps4bP46467 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4bP46467 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Vps4bP46467 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4bP46467 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Vps4bP46467 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4bP46467 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4bP46467 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps4bP46467 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps4bP46467 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Vps4bP46467 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps4bP46467 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Vps4bP46467 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps4bP46467 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps4bP46467 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.6■□□□□ 0.25
Vps4bP46467 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps4bP46467 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps4bP46467 Phf7-203ENSMUST00000226565 1971 ntBASIC16.6■□□□□ 0.25
Vps4bP46467 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Vps4bP46467 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps4bP46467 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.59■□□□□ 0.25
Vps4bP46467 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps4bP46467 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Vps4bP46467 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps4bP46467 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps4bP46467 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps4bP46467 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.59■□□□□ 0.25
Vps4bP46467 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps4bP46467 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.59■□□□□ 0.25
Vps4bP46467 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps4bP46467 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps4bP46467 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Vps4bP46467 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps4bP46467 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps4bP46467 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.59■□□□□ 0.25
Vps4bP46467 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.59■□□□□ 0.25
Vps4bP46467 Gm2274-201ENSMUST00000184539 609 ntBASIC16.59■□□□□ 0.25
Vps4bP46467 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps4bP46467 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps4bP46467 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps4bP46467 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps4bP46467 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps4bP46467 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps4bP46467 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps4bP46467 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps4bP46467 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps4bP46467 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Vps4bP46467 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps4bP46467 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps4bP46467 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps4bP46467 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
Vps4bP46467 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Vps4bP46467 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps4bP46467 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps4bP46467 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps4bP46467 Gm16061-201ENSMUST00000122167 857 ntBASIC16.58■□□□□ 0.24
Vps4bP46467 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms