Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sox18P43680 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox18P43680 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.67■□□□□ 0.1
Sox18P43680 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sox18P43680 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
Sox18P43680 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox18P43680 Gm10175-201ENSMUST00000086013 645 ntBASIC15.67■□□□□ 0.1
Sox18P43680 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sox18P43680 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox18P43680 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox18P43680 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.66■□□□□ 0.1
Sox18P43680 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox18P43680 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sox18P43680 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox18P43680 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sox18P43680 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sox18P43680 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox18P43680 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox18P43680 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.66■□□□□ 0.1
Sox18P43680 Gm6550-201ENSMUST00000187574 993 ntBASIC15.66■□□□□ 0.1
Sox18P43680 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox18P43680 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Sox18P43680 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox18P43680 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox18P43680 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox18P43680 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.66■□□□□ 0.1
Sox18P43680 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox18P43680 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox18P43680 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox18P43680 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.66■□□□□ 0.1
Sox18P43680 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox18P43680 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.66■□□□□ 0.1
Sox18P43680 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox18P43680 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox18P43680 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox18P43680 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox18P43680 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.65■□□□□ 0.1
Sox18P43680 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox18P43680 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox18P43680 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox18P43680 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox18P43680 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox18P43680 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.65■□□□□ 0.1
Sox18P43680 Gm27628-201ENSMUST00000184911 107 ntBASIC15.65■□□□□ 0.1
Sox18P43680 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox18P43680 Gm44430-201ENSMUST00000203376 995 ntBASIC15.65■□□□□ 0.1
Sox18P43680 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.65■□□□□ 0.1
Sox18P43680 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox18P43680 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sox18P43680 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox18P43680 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Sox18P43680 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Sox18P43680 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.65■□□□□ 0.1
Sox18P43680 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox18P43680 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox18P43680 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox18P43680 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox18P43680 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Sox18P43680 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Sox18P43680 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
Sox18P43680 Gm13036-201ENSMUST00000117799 748 ntBASIC15.64■□□□□ 0.09
Sox18P43680 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox18P43680 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.64■□□□□ 0.09
Sox18P43680 Gm25745-201ENSMUST00000174945 133 ntBASIC15.64■□□□□ 0.09
Sox18P43680 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.64■□□□□ 0.09
Sox18P43680 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.64■□□□□ 0.09
Sox18P43680 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox18P43680 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox18P43680 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.64■□□□□ 0.09
Sox18P43680 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.64■□□□□ 0.09
Sox18P43680 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox18P43680 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Sox18P43680 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.64■□□□□ 0.09
Sox18P43680 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox18P43680 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.63■□□□□ 0.09
Sox18P43680 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Sox18P43680 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox18P43680 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox18P43680 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC15.63■□□□□ 0.09
Sox18P43680 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox18P43680 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Sox18P43680 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox18P43680 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Sox18P43680 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Sox18P43680 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Sox18P43680 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.63■□□□□ 0.09
Sox18P43680 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.63■□□□□ 0.09
Sox18P43680 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Sox18P43680 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Sox18P43680 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Sox18P43680 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox18P43680 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Sox18P43680 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox18P43680 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox18P43680 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox18P43680 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox18P43680 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Sox18P43680 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Sox18P43680 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Sox18P43680 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms