Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Gm7791-201ENSMUST00000219066 539 ntBASIC16.89■□□□□ 0.29
Msh2P43247 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh2P43247 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh2P43247 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Msh2P43247 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Msh2P43247 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.89■□□□□ 0.29
Msh2P43247 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.89■□□□□ 0.29
Msh2P43247 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh2P43247 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh2P43247 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh2P43247 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh2P43247 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Msh2P43247 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh2P43247 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh2P43247 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.89■□□□□ 0.29
Msh2P43247 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Msh2P43247 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh2P43247 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.88■□□□□ 0.29
Msh2P43247 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh2P43247 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh2P43247 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh2P43247 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh2P43247 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Msh2P43247 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh2P43247 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh2P43247 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh2P43247 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh2P43247 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.88■□□□□ 0.29
Msh2P43247 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh2P43247 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Msh2P43247 Gm43799-201ENSMUST00000201845 579 ntBASIC16.88■□□□□ 0.29
Msh2P43247 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh2P43247 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Msh2P43247 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh2P43247 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Msh2P43247 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Msh2P43247 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Msh2P43247 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Msh2P43247 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh2P43247 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Msh2P43247 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh2P43247 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Msh2P43247 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh2P43247 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh2P43247 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh2P43247 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Msh2P43247 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh2P43247 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Msh2P43247 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh2P43247 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Msh2P43247 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Msh2P43247 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.87■□□□□ 0.29
Msh2P43247 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Msh2P43247 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh2P43247 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh2P43247 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh2P43247 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Msh2P43247 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Msh2P43247 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Msh2P43247 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Msh2P43247 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh2P43247 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Msh2P43247 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh2P43247 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Msh2P43247 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh2P43247 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh2P43247 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh2P43247 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Msh2P43247 Gm13559-201ENSMUST00000120476 863 ntBASIC16.86■□□□□ 0.29
Msh2P43247 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.86■□□□□ 0.29
Msh2P43247 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Msh2P43247 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Msh2P43247 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.86■□□□□ 0.29
Msh2P43247 Il3ra-202ENSMUST00000223589 738 ntBASIC16.86■□□□□ 0.29
Msh2P43247 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh2P43247 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh2P43247 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh2P43247 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh2P43247 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Msh2P43247 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Msh2P43247 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh2P43247 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Msh2P43247 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Msh2P43247 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Msh2P43247 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.86■□□□□ 0.29
Msh2P43247 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh2P43247 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Msh2P43247 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh2P43247 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Msh2P43247 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh2P43247 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Msh2P43247 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh2P43247 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Msh2P43247 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.85■□□□□ 0.29
Msh2P43247 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Msh2P43247 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Msh2P43247 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.85■□□□□ 0.29
Msh2P43247 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh2P43247 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Msh2P43247 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms