Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Abca1P41233 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Abca1P41233 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Abca1P41233 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Abca1P41233 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Abca1P41233 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Abca1P41233 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.57□□□□□ -0.24
Abca1P41233 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Abca1P41233 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Abca1P41233 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Abca1P41233 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Abca1P41233 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Abca1P41233 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Abca1P41233 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Abca1P41233 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Abca1P41233 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Abca1P41233 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Abca1P41233 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Abca1P41233 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Abca1P41233 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.57□□□□□ -0.24
Abca1P41233 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Abca1P41233 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Abca1P41233 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Abca1P41233 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.57□□□□□ -0.24
Abca1P41233 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Abca1P41233 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.57□□□□□ -0.24
Abca1P41233 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.57□□□□□ -0.24
Abca1P41233 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Abca1P41233 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Abca1P41233 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.57□□□□□ -0.24
Abca1P41233 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Abca1P41233 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Abca1P41233 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.57□□□□□ -0.24
Abca1P41233 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Abca1P41233 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Abca1P41233 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Abca1P41233 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Rprl3-201ENSMUST00000157400 290 ntBASIC13.56□□□□□ -0.24
Abca1P41233 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.56□□□□□ -0.24
Abca1P41233 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Abca1P41233 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.56□□□□□ -0.24
Abca1P41233 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.56□□□□□ -0.24
Abca1P41233 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Gm10052-201ENSMUST00000168019 960 ntBASIC13.56□□□□□ -0.24
Abca1P41233 Mir8112-201ENSMUST00000184382 131 ntBASIC13.56□□□□□ -0.24
Abca1P41233 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.56□□□□□ -0.24
Abca1P41233 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.56□□□□□ -0.24
Abca1P41233 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Gm7729-201ENSMUST00000050143 801 ntBASIC13.56□□□□□ -0.24
Abca1P41233 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Abca1P41233 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Abca1P41233 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Abca1P41233 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Abca1P41233 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Abca1P41233 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Abca1P41233 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Abca1P41233 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Abca1P41233 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.55□□□□□ -0.24
Abca1P41233 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.55□□□□□ -0.24
Abca1P41233 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Abca1P41233 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Abca1P41233 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Abca1P41233 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Abca1P41233 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Abca1P41233 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Abca1P41233 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Abca1P41233 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Abca1P41233 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Abca1P41233 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.55□□□□□ -0.24
Abca1P41233 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Abca1P41233 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Abca1P41233 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Abca1P41233 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Abca1P41233 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Abca1P41233 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Abca1P41233 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.54□□□□□ -0.24
Abca1P41233 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Abca1P41233 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Abca1P41233 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Abca1P41233 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Abca1P41233 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Abca1P41233 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Abca1P41233 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms