Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RxrbP28704 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RxrbP28704 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RxrbP28704 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RxrbP28704 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RxrbP28704 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RxrbP28704 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RxrbP28704 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RxrbP28704 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.47■□□□□ 0.23
RxrbP28704 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RxrbP28704 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RxrbP28704 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RxrbP28704 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RxrbP28704 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RxrbP28704 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RxrbP28704 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RxrbP28704 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RxrbP28704 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RxrbP28704 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RxrbP28704 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RxrbP28704 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RxrbP28704 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RxrbP28704 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RxrbP28704 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RxrbP28704 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RxrbP28704 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RxrbP28704 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RxrbP28704 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.45■□□□□ 0.22
RxrbP28704 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RxrbP28704 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RxrbP28704 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RxrbP28704 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RxrbP28704 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RxrbP28704 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RxrbP28704 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RxrbP28704 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RxrbP28704 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RxrbP28704 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RxrbP28704 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RxrbP28704 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
RxrbP28704 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RxrbP28704 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RxrbP28704 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RxrbP28704 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RxrbP28704 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RxrbP28704 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RxrbP28704 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.44■□□□□ 0.22
RxrbP28704 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
RxrbP28704 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RxrbP28704 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RxrbP28704 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RxrbP28704 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RxrbP28704 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RxrbP28704 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RxrbP28704 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RxrbP28704 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RxrbP28704 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RxrbP28704 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RxrbP28704 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.44■□□□□ 0.22
RxrbP28704 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RxrbP28704 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RxrbP28704 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RxrbP28704 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RxrbP28704 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RxrbP28704 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RxrbP28704 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.44■□□□□ 0.22
RxrbP28704 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RxrbP28704 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RxrbP28704 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RxrbP28704 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RxrbP28704 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RxrbP28704 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.44■□□□□ 0.22
RxrbP28704 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.44■□□□□ 0.22
RxrbP28704 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RxrbP28704 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RxrbP28704 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RxrbP28704 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RxrbP28704 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RxrbP28704 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RxrbP28704 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RxrbP28704 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RxrbP28704 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RxrbP28704 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RxrbP28704 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RxrbP28704 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RxrbP28704 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RxrbP28704 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.43■□□□□ 0.22
RxrbP28704 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RxrbP28704 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RxrbP28704 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RxrbP28704 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RxrbP28704 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
RxrbP28704 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RxrbP28704 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RxrbP28704 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RxrbP28704 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RxrbP28704 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RxrbP28704 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RxrbP28704 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RxrbP28704 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms