Protein–RNA interactions for Protein: P28236

Gja8, Gap junction alpha-8 protein, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja8P28236 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.24■□□□□ 0.51
Gja8P28236 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gja8P28236 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Gja8P28236 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gja8P28236 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Gja8P28236 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Gja8P28236 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.23■□□□□ 0.51
Gja8P28236 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Gja8P28236 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gja8P28236 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Gja8P28236 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Gja8P28236 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gja8P28236 Fst-202ENSMUST00000223640 2612 ntBASIC18.23■□□□□ 0.51
Gja8P28236 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Gja8P28236 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gja8P28236 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gja8P28236 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gja8P28236 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gja8P28236 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Gja8P28236 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gja8P28236 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gja8P28236 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gja8P28236 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.22■□□□□ 0.51
Gja8P28236 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gja8P28236 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gja8P28236 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gja8P28236 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Gja8P28236 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.22■□□□□ 0.51
Gja8P28236 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.22■□□□□ 0.51
Gja8P28236 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.22■□□□□ 0.51
Gja8P28236 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.22■□□□□ 0.51
Gja8P28236 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gja8P28236 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.22■□□□□ 0.51
Gja8P28236 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gja8P28236 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gja8P28236 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gja8P28236 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gja8P28236 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Gja8P28236 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gja8P28236 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gja8P28236 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gja8P28236 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gja8P28236 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gja8P28236 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gja8P28236 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gja8P28236 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.21■□□□□ 0.51
Gja8P28236 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gja8P28236 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gja8P28236 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gja8P28236 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gja8P28236 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.21■□□□□ 0.51
Gja8P28236 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gja8P28236 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gja8P28236 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gja8P28236 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gja8P28236 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gja8P28236 Gm7506-201ENSMUST00000207758 815 ntBASIC18.21■□□□□ 0.51
Gja8P28236 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.21■□□□□ 0.51
Gja8P28236 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gja8P28236 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gja8P28236 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Gja8P28236 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gja8P28236 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gja8P28236 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gja8P28236 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gja8P28236 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gja8P28236 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Gja8P28236 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gja8P28236 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Gja8P28236 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.2■□□□□ 0.5
Gja8P28236 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gja8P28236 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.2■□□□□ 0.5
Gja8P28236 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gja8P28236 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.2■□□□□ 0.5
Gja8P28236 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.2■□□□□ 0.5
Gja8P28236 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gja8P28236 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.2■□□□□ 0.5
Gja8P28236 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.2■□□□□ 0.5
Gja8P28236 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gja8P28236 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.2■□□□□ 0.5
Gja8P28236 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gja8P28236 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gja8P28236 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gja8P28236 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gja8P28236 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gja8P28236 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gja8P28236 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gja8P28236 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gja8P28236 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Gja8P28236 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gja8P28236 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gja8P28236 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gja8P28236 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gja8P28236 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gja8P28236 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gja8P28236 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.19■□□□□ 0.5
Gja8P28236 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gja8P28236 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.19■□□□□ 0.5
Gja8P28236 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gja8P28236 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms