Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Aldh1a1P24549 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Aldh1a1P24549 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Aldh1a1P24549 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Aldh1a1P24549 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Aldh1a1P24549 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.54■□□□□ 0.4
Aldh1a1P24549 Gm25406-201ENSMUST00000157599 105 ntBASIC17.54■□□□□ 0.4
Aldh1a1P24549 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.54■□□□□ 0.4
Aldh1a1P24549 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.54■□□□□ 0.4
Aldh1a1P24549 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Aldh1a1P24549 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Aldh1a1P24549 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
Aldh1a1P24549 Gm10175-201ENSMUST00000086013 645 ntBASIC17.54■□□□□ 0.4
Aldh1a1P24549 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Aldh1a1P24549 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Aldh1a1P24549 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Aldh1a1P24549 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Aldh1a1P24549 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Aldh1a1P24549 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Aldh1a1P24549 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Auts2-212ENSMUST00000178555 309 ntBASIC17.53■□□□□ 0.4
Aldh1a1P24549 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Aldh1a1P24549 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.53■□□□□ 0.4
Aldh1a1P24549 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Aldh1a1P24549 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.52■□□□□ 0.4
Aldh1a1P24549 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Aldh1a1P24549 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Aldh1a1P24549 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.52■□□□□ 0.4
Aldh1a1P24549 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Aldh1a1P24549 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Aldh1a1P24549 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Aldh1a1P24549 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Aldh1a1P24549 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.52■□□□□ 0.4
Aldh1a1P24549 Gm11764-201ENSMUST00000120221 623 ntBASIC17.52■□□□□ 0.4
Aldh1a1P24549 Gm25911-201ENSMUST00000157621 56 ntBASIC17.52■□□□□ 0.4
Aldh1a1P24549 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Aldh1a1P24549 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.52■□□□□ 0.4
Aldh1a1P24549 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Aldh1a1P24549 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Aldh1a1P24549 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Aldh1a1P24549 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Aldh1a1P24549 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Aldh1a1P24549 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Aldh1a1P24549 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Aldh1a1P24549 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Aldh1a1P24549 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Aldh1a1P24549 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Aldh1a1P24549 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.51■□□□□ 0.39
Aldh1a1P24549 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Aldh1a1P24549 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Aldh1a1P24549 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.51■□□□□ 0.39
Aldh1a1P24549 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Aldh1a1P24549 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC17.51■□□□□ 0.39
Aldh1a1P24549 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Aldh1a1P24549 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Aldh1a1P24549 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.51■□□□□ 0.39
Aldh1a1P24549 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Aldh1a1P24549 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Aldh1a1P24549 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Aldh1a1P24549 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Aldh1a1P24549 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Aldh1a1P24549 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Aldh1a1P24549 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.51■□□□□ 0.39
Aldh1a1P24549 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Aldh1a1P24549 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.5■□□□□ 0.39
Aldh1a1P24549 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Aldh1a1P24549 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Aldh1a1P24549 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.5■□□□□ 0.39
Aldh1a1P24549 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.5■□□□□ 0.39
Aldh1a1P24549 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Aldh1a1P24549 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Aldh1a1P24549 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.5■□□□□ 0.39
Aldh1a1P24549 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.5■□□□□ 0.39
Aldh1a1P24549 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Aldh1a1P24549 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC17.5■□□□□ 0.39
Aldh1a1P24549 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.5■□□□□ 0.39
Aldh1a1P24549 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.5■□□□□ 0.39
Aldh1a1P24549 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.5■□□□□ 0.39
Aldh1a1P24549 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.5■□□□□ 0.39
Aldh1a1P24549 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms