Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf8P23611 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.66■□□□□ 0.42
Irf8P23611 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf8P23611 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf8P23611 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Irf8P23611 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.66■□□□□ 0.42
Irf8P23611 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Irf8P23611 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf8P23611 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Irf8P23611 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Irf8P23611 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf8P23611 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf8P23611 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf8P23611 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Irf8P23611 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Irf8P23611 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf8P23611 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf8P23611 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Irf8P23611 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Irf8P23611 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Irf8P23611 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf8P23611 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf8P23611 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Irf8P23611 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf8P23611 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf8P23611 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf8P23611 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Irf8P23611 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Irf8P23611 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.65■□□□□ 0.42
Irf8P23611 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf8P23611 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf8P23611 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf8P23611 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.65■□□□□ 0.42
Irf8P23611 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf8P23611 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Irf8P23611 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf8P23611 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf8P23611 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf8P23611 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Irf8P23611 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Irf8P23611 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.65■□□□□ 0.42
Irf8P23611 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Irf8P23611 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.64■□□□□ 0.42
Irf8P23611 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Irf8P23611 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Irf8P23611 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Irf8P23611 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Irf8P23611 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.64■□□□□ 0.41
Irf8P23611 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
Irf8P23611 Gm27742-201ENSMUST00000184667 60 ntBASIC17.64■□□□□ 0.41
Irf8P23611 Gm27704-201ENSMUST00000185094 107 ntBASIC17.64■□□□□ 0.41
Irf8P23611 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.64■□□□□ 0.41
Irf8P23611 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Irf8P23611 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Irf8P23611 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Irf8P23611 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Irf8P23611 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Irf8P23611 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Irf8P23611 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Irf8P23611 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Irf8P23611 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.64■□□□□ 0.41
Irf8P23611 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Irf8P23611 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Irf8P23611 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.64■□□□□ 0.41
Irf8P23611 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf8P23611 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf8P23611 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.63■□□□□ 0.41
Irf8P23611 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf8P23611 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Irf8P23611 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf8P23611 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf8P23611 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf8P23611 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf8P23611 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf8P23611 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Irf8P23611 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.63■□□□□ 0.41
Irf8P23611 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Irf8P23611 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Irf8P23611 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Irf8P23611 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf8P23611 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Irf8P23611 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf8P23611 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf8P23611 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf8P23611 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Irf8P23611 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf8P23611 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Irf8P23611 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Irf8P23611 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Irf8P23611 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Irf8P23611 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Irf8P23611 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.62■□□□□ 0.41
Irf8P23611 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Irf8P23611 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Irf8P23611 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Irf8P23611 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Irf8P23611 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Irf8P23611 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Irf8P23611 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Irf8P23611 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms