Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf9P20334 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf9P20334 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf9P20334 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf9P20334 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Tnfrsf9P20334 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf9P20334 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Tnfrsf9P20334 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf9P20334 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.34□□□□□ -0.27
Tnfrsf9P20334 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tnfrsf9P20334 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tnfrsf9P20334 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Tnfrsf9P20334 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tnfrsf9P20334 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Gm11452-201ENSMUST00000122376 690 ntBASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Mir8098-201ENSMUST00000184011 137 ntBASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Il3ra-202ENSMUST00000223589 738 ntBASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf9P20334 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Tnfrsf9P20334 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tnfrsf9P20334 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf9P20334 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Gm37025-201ENSMUST00000195159 829 ntBASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Gm43347-201ENSMUST00000200226 580 ntBASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Gm45328-201ENSMUST00000210942 917 ntBASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf9P20334 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms