Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdx1P18111 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx1P18111 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cdx1P18111 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx1P18111 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdx1P18111 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx1P18111 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx1P18111 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx1P18111 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.25□□□□□ -0.29
Cdx1P18111 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx1P18111 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx1P18111 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx1P18111 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Cdx1P18111 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx1P18111 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx1P18111 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx1P18111 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx1P18111 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx1P18111 Gm10698-201ENSMUST00000182663 604 ntBASIC13.25□□□□□ -0.29
Cdx1P18111 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdx1P18111 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx1P18111 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cdx1P18111 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cdx1P18111 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx1P18111 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx1P18111 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx1P18111 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cdx1P18111 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx1P18111 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Cdx1P18111 Asic1-205ENSMUST00000228185 1818 ntBASIC13.25□□□□□ -0.29
Cdx1P18111 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdx1P18111 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Cdx1P18111 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.24□□□□□ -0.29
Cdx1P18111 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.24□□□□□ -0.29
Cdx1P18111 Flg-201ENSMUST00000050758 1488 ntBASIC13.24□□□□□ -0.29
Cdx1P18111 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Cdx1P18111 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cdx1P18111 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Cdx1P18111 Mir1199-201ENSMUST00000117015 119 ntBASIC13.24□□□□□ -0.29
Cdx1P18111 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdx1P18111 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Cdx1P18111 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdx1P18111 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.24□□□□□ -0.29
Cdx1P18111 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.24□□□□□ -0.29
Cdx1P18111 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.24□□□□□ -0.29
Cdx1P18111 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.24□□□□□ -0.29
Cdx1P18111 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdx1P18111 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdx1P18111 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cdx1P18111 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx1P18111 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cdx1P18111 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Cdx1P18111 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx1P18111 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cdx1P18111 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx1P18111 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx1P18111 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx1P18111 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cdx1P18111 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx1P18111 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx1P18111 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx1P18111 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cdx1P18111 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.23□□□□□ -0.29
Cdx1P18111 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx1P18111 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdx1P18111 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx1P18111 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx1P18111 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx1P18111 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx1P18111 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx1P18111 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx1P18111 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx1P18111 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx1P18111 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdx1P18111 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdx1P18111 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Cdx1P18111 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms