Protein–RNA interactions for Protein: P15314

Irf1, Interferon regulatory factor 1, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf1P15314 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Irf1P15314 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf1P15314 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Irf1P15314 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Irf1P15314 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Irf1P15314 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf1P15314 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Irf1P15314 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.12■□□□□ 0.01
Irf1P15314 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Irf1P15314 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf1P15314 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf1P15314 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.12■□□□□ 0.01
Irf1P15314 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.12■□□□□ 0.01
Irf1P15314 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Irf1P15314 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf1P15314 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Irf1P15314 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf1P15314 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf1P15314 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf1P15314 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf1P15314 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Irf1P15314 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf1P15314 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Irf1P15314 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf1P15314 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Irf1P15314 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf1P15314 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Irf1P15314 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf1P15314 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf1P15314 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf1P15314 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf1P15314 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Irf1P15314 Gm6623-201ENSMUST00000173570 544 ntBASIC15.11■□□□□ 0.01
Irf1P15314 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.11■□□□□ 0.01
Irf1P15314 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Irf1P15314 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf1P15314 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf1P15314 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Irf1P15314 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf1P15314 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Irf1P15314 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf1P15314 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Irf1P15314 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf1P15314 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf1P15314 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Irf1P15314 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Irf1P15314 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf1P15314 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf1P15314 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.1■□□□□ 0.01
Irf1P15314 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Irf1P15314 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf1P15314 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Irf1P15314 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf1P15314 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf1P15314 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Irf1P15314 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf1P15314 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf1P15314 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.1■□□□□ 0.01
Irf1P15314 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Irf1P15314 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.1■□□□□ 0.01
Irf1P15314 Gm29518-201ENSMUST00000190858 372 ntBASIC15.1■□□□□ 0.01
Irf1P15314 Gm37722-201ENSMUST00000193757 208 ntBASIC15.1■□□□□ 0.01
Irf1P15314 Gm17808-201ENSMUST00000200859 894 ntBASIC15.1■□□□□ 0.01
Irf1P15314 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.1■□□□□ 0.01
Irf1P15314 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Irf1P15314 AC073947.1-201ENSMUST00000216991 649 ntBASIC15.1■□□□□ 0.01
Irf1P15314 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.1■□□□□ 0.01
Irf1P15314 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Irf1P15314 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.1■□□□□ 0.01
Irf1P15314 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Irf1P15314 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf1P15314 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf1P15314 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.1■□□□□ 0.01
Irf1P15314 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf1P15314 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Irf1P15314 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Irf1P15314 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf1P15314 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Irf1P15314 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf1P15314 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf1P15314 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf1P15314 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.09■□□□□ 0.01
Irf1P15314 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf1P15314 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Irf1P15314 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.09■□□□□ 0.01
Irf1P15314 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf1P15314 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf1P15314 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf1P15314 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf1P15314 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf1P15314 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Irf1P15314 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf1P15314 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf1P15314 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.09■□□□□ 0.01
Irf1P15314 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf1P15314 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf1P15314 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Irf1P15314 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Irf1P15314 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Irf1P15314 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms