Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cntn1P12960 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cntn1P12960 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cntn1P12960 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cntn1P12960 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.68■□□□□ 0.1
Cntn1P12960 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cntn1P12960 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.68■□□□□ 0.1
Cntn1P12960 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cntn1P12960 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cntn1P12960 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cntn1P12960 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cntn1P12960 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cntn1P12960 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntn1P12960 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntn1P12960 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.67■□□□□ 0.1
Cntn1P12960 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntn1P12960 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cntn1P12960 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntn1P12960 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntn1P12960 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cntn1P12960 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntn1P12960 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.67■□□□□ 0.1
Cntn1P12960 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntn1P12960 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.67■□□□□ 0.1
Cntn1P12960 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntn1P12960 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cntn1P12960 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntn1P12960 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntn1P12960 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntn1P12960 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntn1P12960 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Cntn1P12960 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cntn1P12960 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cntn1P12960 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cntn1P12960 Haglr-201ENSMUST00000100000 2085 ntBASIC15.66■□□□□ 0.1
Cntn1P12960 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cntn1P12960 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.66■□□□□ 0.1
Cntn1P12960 Gm44430-201ENSMUST00000203376 995 ntBASIC15.66■□□□□ 0.1
Cntn1P12960 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cntn1P12960 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.66■□□□□ 0.1
Cntn1P12960 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cntn1P12960 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cntn1P12960 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cntn1P12960 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cntn1P12960 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cntn1P12960 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cntn1P12960 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cntn1P12960 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cntn1P12960 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cntn1P12960 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cntn1P12960 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cntn1P12960 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cntn1P12960 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cntn1P12960 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntn1P12960 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.65■□□□□ 0.1
Cntn1P12960 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntn1P12960 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntn1P12960 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Cntn1P12960 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cntn1P12960 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.65■□□□□ 0.1
Cntn1P12960 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cntn1P12960 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.65■□□□□ 0.1
Cntn1P12960 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntn1P12960 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntn1P12960 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntn1P12960 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntn1P12960 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Cntn1P12960 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntn1P12960 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntn1P12960 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntn1P12960 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntn1P12960 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntn1P12960 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cntn1P12960 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
Cntn1P12960 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cntn1P12960 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Cntn1P12960 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Cntn1P12960 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
Cntn1P12960 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cntn1P12960 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cntn1P12960 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.64■□□□□ 0.09
Cntn1P12960 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cntn1P12960 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cntn1P12960 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Cntn1P12960 Gm7153-201ENSMUST00000117092 455 ntBASIC15.64■□□□□ 0.09
Cntn1P12960 Gm12895-201ENSMUST00000122214 226 ntBASIC15.64■□□□□ 0.09
Cntn1P12960 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cntn1P12960 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cntn1P12960 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cntn1P12960 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cntn1P12960 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cntn1P12960 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cntn1P12960 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cntn1P12960 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cntn1P12960 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cntn1P12960 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cntn1P12960 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cntn1P12960 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Cntn1P12960 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cntn1P12960 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms