Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.26□□□□□ -0.13
UbbP0CG49 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UbbP0CG49 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UbbP0CG49 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UbbP0CG49 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UbbP0CG49 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.26□□□□□ -0.13
UbbP0CG49 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UbbP0CG49 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UbbP0CG49 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UbbP0CG49 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.26□□□□□ -0.13
UbbP0CG49 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UbbP0CG49 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.26□□□□□ -0.13
UbbP0CG49 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UbbP0CG49 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UbbP0CG49 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UbbP0CG49 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UbbP0CG49 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
UbbP0CG49 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UbbP0CG49 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.25□□□□□ -0.13
UbbP0CG49 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
UbbP0CG49 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UbbP0CG49 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UbbP0CG49 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UbbP0CG49 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UbbP0CG49 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UbbP0CG49 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UbbP0CG49 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UbbP0CG49 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
UbbP0CG49 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UbbP0CG49 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UbbP0CG49 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
UbbP0CG49 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.25□□□□□ -0.13
UbbP0CG49 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
UbbP0CG49 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
UbbP0CG49 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
UbbP0CG49 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
UbbP0CG49 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UbbP0CG49 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
UbbP0CG49 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
UbbP0CG49 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.24□□□□□ -0.13
UbbP0CG49 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
UbbP0CG49 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
UbbP0CG49 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
UbbP0CG49 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
UbbP0CG49 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
UbbP0CG49 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Gm7638-201ENSMUST00000121348 967 ntBASIC14.24□□□□□ -0.13
UbbP0CG49 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
UbbP0CG49 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
UbbP0CG49 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
UbbP0CG49 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
UbbP0CG49 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
UbbP0CG49 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
UbbP0CG49 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UbbP0CG49 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UbbP0CG49 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.23□□□□□ -0.13
UbbP0CG49 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
UbbP0CG49 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.23□□□□□ -0.13
UbbP0CG49 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.23□□□□□ -0.13
UbbP0CG49 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.23□□□□□ -0.13
UbbP0CG49 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
UbbP0CG49 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
UbbP0CG49 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UbbP0CG49 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
UbbP0CG49 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UbbP0CG49 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UbbP0CG49 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
UbbP0CG49 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
UbbP0CG49 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
UbbP0CG49 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UbbP0CG49 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.23□□□□□ -0.13
UbbP0CG49 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.23□□□□□ -0.13
UbbP0CG49 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UbbP0CG49 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UbbP0CG49 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms