Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim1P0C8K7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim1P0C8K7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smim1P0C8K7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smim1P0C8K7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smim1P0C8K7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Smim1P0C8K7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smim1P0C8K7 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim1P0C8K7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim1P0C8K7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smim1P0C8K7 Gm10129-202ENSMUST00000193100 1316 ntBASIC11.34□□□□□ -0.59
Smim1P0C8K7 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smim1P0C8K7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Smim1P0C8K7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.33□□□□□ -0.6
Smim1P0C8K7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Gm43137-201ENSMUST00000198052 594 ntBASIC11.33□□□□□ -0.6
Smim1P0C8K7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Gm5812-201ENSMUST00000061073 957 ntBASIC11.33□□□□□ -0.6
Smim1P0C8K7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Smim1P0C8K7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smim1P0C8K7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC11.32□□□□□ -0.6
Smim1P0C8K7 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 BC037039-201ENSMUST00000192003 2205 ntBASIC11.32□□□□□ -0.6
Smim1P0C8K7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Smim1P0C8K7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.31□□□□□ -0.6
Smim1P0C8K7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smim1P0C8K7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms