Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc9P09633 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc9P09633 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc9P09633 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxc9P09633 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Hoxc9P09633 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc9P09633 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Hoxc9P09633 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc9P09633 Gm27646-201ENSMUST00000183989 110 ntBASIC21.17■□□□□ 0.98
Hoxc9P09633 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc9P09633 Gm18622-201ENSMUST00000219361 595 ntBASIC21.17■□□□□ 0.98
Hoxc9P09633 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc9P09633 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc9P09633 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc9P09633 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc9P09633 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hoxc9P09633 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.17■□□□□ 0.98
Hoxc9P09633 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxc9P09633 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxc9P09633 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxc9P09633 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC21.16■□□□□ 0.98
Hoxc9P09633 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxc9P09633 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC21.16■□□□□ 0.98
Hoxc9P09633 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC21.16■□□□□ 0.98
Hoxc9P09633 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxc9P09633 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxc9P09633 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc9P09633 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc9P09633 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc9P09633 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc9P09633 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc9P09633 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc9P09633 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc9P09633 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc9P09633 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc9P09633 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxc9P09633 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Hoxc9P09633 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Hoxc9P09633 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hoxc9P09633 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hoxc9P09633 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Hoxc9P09633 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Hoxc9P09633 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxc9P09633 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC21.14■□□□□ 0.97
Hoxc9P09633 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxc9P09633 Gm43575-201ENSMUST00000196420 516 ntBASIC21.14■□□□□ 0.97
Hoxc9P09633 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxc9P09633 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxc9P09633 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Hoxc9P09633 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxc9P09633 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxc9P09633 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxc9P09633 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxc9P09633 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC21.14■□□□□ 0.97
Hoxc9P09633 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxc9P09633 Gm16401-202ENSMUST00000197463 2074 ntBASIC21.14■□□□□ 0.97
Hoxc9P09633 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxc9P09633 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC21.14■□□□□ 0.97
Hoxc9P09633 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Hoxc9P09633 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc9P09633 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Hoxc9P09633 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc9P09633 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
Hoxc9P09633 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC21.13■□□□□ 0.97
Hoxc9P09633 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc9P09633 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc9P09633 Gm5682-201ENSMUST00000173402 505 ntBASIC21.13■□□□□ 0.97
Hoxc9P09633 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Hoxc9P09633 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC21.13■□□□□ 0.97
Hoxc9P09633 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc9P09633 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc9P09633 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc9P09633 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc9P09633 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc9P09633 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC21.13■□□□□ 0.97
Hoxc9P09633 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc9P09633 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC21.13■□□□□ 0.97
Hoxc9P09633 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc9P09633 Gm43702-201ENSMUST00000198772 2546 ntBASIC21.13■□□□□ 0.97
Hoxc9P09633 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc9P09633 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Hoxc9P09633 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxc9P09633 Gm36858-201ENSMUST00000194501 2391 ntBASIC21.12■□□□□ 0.97
Hoxc9P09633 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc9P09633 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc9P09633 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc9P09633 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc9P09633 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc9P09633 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc9P09633 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc9P09633 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc9P09633 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc9P09633 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Hoxc9P09633 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Hoxc9P09633 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc9P09633 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc9P09633 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC21.12■□□□□ 0.97
Hoxc9P09633 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Hoxc9P09633 AC090659.1-201ENSMUST00000224334 768 ntBASIC21.12■□□□□ 0.97
Hoxc9P09633 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms