Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P04213 Mir1668-201ENSMUST00000184114 107 ntBASIC15.72■□□□□ 0.11
P04213 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.72■□□□□ 0.11
P04213 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04213 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04213 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04213 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P04213 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04213 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04213 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
P04213 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04213 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
P04213 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04213 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
P04213 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04213 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04213 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04213 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04213 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.71■□□□□ 0.11
P04213 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
P04213 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
P04213 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
P04213 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Gm18959-201ENSMUST00000208954 655 ntBASIC15.71■□□□□ 0.11
P04213 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.71■□□□□ 0.11
P04213 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.71■□□□□ 0.11
P04213 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.71■□□□□ 0.11
P04213 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04213 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.71■□□□□ 0.11
P04213 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
P04213 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.71■□□□□ 0.1
P04213 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04213 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04213 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.7■□□□□ 0.1
P04213 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04213 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
P04213 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.7■□□□□ 0.1
P04213 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04213 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04213 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.7■□□□□ 0.1
P04213 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P04213 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.7■□□□□ 0.1
P04213 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P04213 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.7■□□□□ 0.1
P04213 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.7■□□□□ 0.1
P04213 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.7■□□□□ 0.1
P04213 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P04213 Mir6982-201ENSMUST00000184354 68 ntBASIC15.7■□□□□ 0.1
P04213 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.7■□□□□ 0.1
P04213 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04213 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04213 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.7■□□□□ 0.1
P04213 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04213 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.69■□□□□ 0.1
P04213 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
P04213 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.69■□□□□ 0.1
P04213 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.69■□□□□ 0.1
P04213 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
P04213 Gm29707-201ENSMUST00000196325 491 ntBASIC15.69■□□□□ 0.1
P04213 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.69■□□□□ 0.1
P04213 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04213 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms