Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TcraP01849 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12□□□□□ -0.49
TcraP01849 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 Gm6211-202ENSMUST00000167849 925 ntBASIC12□□□□□ -0.49
TcraP01849 Gm26571-201ENSMUST00000181399 666 ntBASIC12□□□□□ -0.49
TcraP01849 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12□□□□□ -0.49
TcraP01849 Gm42555-201ENSMUST00000199304 1039 ntBASIC12□□□□□ -0.49
TcraP01849 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12□□□□□ -0.49
TcraP01849 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TcraP01849 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Prob1-201ENSMUST00000097619 3021 ntBASIC11.99□□□□□ -0.49
TcraP01849 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
TcraP01849 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC11.99□□□□□ -0.49
TcraP01849 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
TcraP01849 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
TcraP01849 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.99□□□□□ -0.49
TcraP01849 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TcraP01849 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.98□□□□□ -0.49
TcraP01849 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Gm19721-201ENSMUST00000195284 1764 ntBASIC11.98□□□□□ -0.49
TcraP01849 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Gm10849-201ENSMUST00000100397 618 ntBASIC11.98□□□□□ -0.49
TcraP01849 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC11.98□□□□□ -0.49
TcraP01849 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
TcraP01849 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC11.98□□□□□ -0.49
TcraP01849 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC11.98□□□□□ -0.49
TcraP01849 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC11.98□□□□□ -0.49
TcraP01849 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC11.98□□□□□ -0.49
TcraP01849 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
TcraP01849 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
TcraP01849 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TcraP01849 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms