Protein–RNA interactions for Protein: P01798

Ig heavy chain V-III region E109, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01798 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P01798 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P01798 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.02□□□□□ -0.16
P01798 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.02□□□□□ -0.16
P01798 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
P01798 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P01798 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.02□□□□□ -0.16
P01798 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
P01798 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
P01798 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P01798 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
P01798 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.02□□□□□ -0.16
P01798 Gm7638-201ENSMUST00000121348 967 ntBASIC14.02□□□□□ -0.17
P01798 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.02□□□□□ -0.17
P01798 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.02□□□□□ -0.17
P01798 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.02□□□□□ -0.17
P01798 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
P01798 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
P01798 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P01798 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P01798 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P01798 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P01798 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.02□□□□□ -0.17
P01798 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P01798 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
P01798 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01798 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
P01798 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01798 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01798 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01798 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
P01798 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01798 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01798 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
P01798 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01798 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01798 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01798 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.01□□□□□ -0.17
P01798 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
P01798 Gm9731-201ENSMUST00000209480 747 ntBASIC14.01□□□□□ -0.17
P01798 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01798 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01798 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01798 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01798 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01798 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01798 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01798 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01798 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
P01798 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
P01798 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
P01798 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
P01798 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P01798 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
P01798 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
P01798 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14□□□□□ -0.17
P01798 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
P01798 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14□□□□□ -0.17
P01798 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P01798 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P01798 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
P01798 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14□□□□□ -0.17
P01798 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14□□□□□ -0.17
P01798 Gm27000-201ENSMUST00000182943 842 ntBASIC14□□□□□ -0.17
P01798 Gm27389-201ENSMUST00000183622 195 ntBASIC14□□□□□ -0.17
P01798 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14□□□□□ -0.17
P01798 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14□□□□□ -0.17
P01798 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P01798 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P01798 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
P01798 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14□□□□□ -0.17
P01798 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
P01798 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P01798 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
P01798 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P01798 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14□□□□□ -0.17
P01798 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
P01798 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P01798 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14□□□□□ -0.17
P01798 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
P01798 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01798 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01798 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01798 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P01798 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P01798 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01798 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P01798 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P01798 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01798 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P01798 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01798 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01798 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01798 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01798 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
P01798 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01798 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01798 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P01798 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P01798 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms