Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Gm9987-201ENSMUST00000069768 567 ntBASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igh-VJ558P01758 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Gm11355-201ENSMUST00000121120 306 ntBASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.17□□□□□ -0.14
Igh-VJ558P01758 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Igh-VJ558P01758 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Igh-VJ558P01758 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Igh-VJ558P01758 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igh-VJ558P01758 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igh-VJ558P01758 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igh-VJ558P01758 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Igh-VJ558P01758 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igh-VJ558P01758 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.15□□□□□ -0.14
Igh-VJ558P01758 Gm10231-201ENSMUST00000181584 441 ntBASIC14.15□□□□□ -0.14
Igh-VJ558P01758 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igh-VJ558P01758 Gm10175-202ENSMUST00000208752 441 ntBASIC14.15□□□□□ -0.14
Igh-VJ558P01758 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Igh-VJ558P01758 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igh-VJ558P01758 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igh-VJ558P01758 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igh-VJ558P01758 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Igh-VJ558P01758 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Igh-VJ558P01758 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igh-VJ558P01758 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.15□□□□□ -0.14
Igh-VJ558P01758 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Igh-VJ558P01758 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Igh-VJ558P01758 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Igh-VJ558P01758 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms