Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sp1O89090 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Sp1O89090 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sp1O89090 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sp1O89090 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Sp1O89090 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sp1O89090 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.51■□□□□ 0.23
Sp1O89090 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.51■□□□□ 0.23
Sp1O89090 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.51■□□□□ 0.23
Sp1O89090 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.51■□□□□ 0.23
Sp1O89090 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sp1O89090 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sp1O89090 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sp1O89090 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sp1O89090 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Sp1O89090 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sp1O89090 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sp1O89090 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Sp1O89090 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp1O89090 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.5■□□□□ 0.23
Sp1O89090 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.5■□□□□ 0.23
Sp1O89090 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.5■□□□□ 0.23
Sp1O89090 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp1O89090 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp1O89090 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Sp1O89090 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sp1O89090 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.5■□□□□ 0.23
Sp1O89090 Gm5864-201ENSMUST00000202263 970 ntBASIC16.5■□□□□ 0.23
Sp1O89090 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.5■□□□□ 0.23
Sp1O89090 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sp1O89090 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Sp1O89090 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp1O89090 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp1O89090 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp1O89090 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sp1O89090 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
Sp1O89090 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp1O89090 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp1O89090 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sp1O89090 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp1O89090 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp1O89090 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sp1O89090 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp1O89090 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp1O89090 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.49■□□□□ 0.23
Sp1O89090 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp1O89090 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp1O89090 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.49■□□□□ 0.23
Sp1O89090 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.49■□□□□ 0.23
Sp1O89090 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp1O89090 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sp1O89090 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sp1O89090 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sp1O89090 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.49■□□□□ 0.23
Sp1O89090 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp1O89090 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp1O89090 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp1O89090 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Sp1O89090 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sp1O89090 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp1O89090 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp1O89090 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp1O89090 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp1O89090 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp1O89090 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Sp1O89090 Gm25745-201ENSMUST00000174945 133 ntBASIC16.48■□□□□ 0.23
Sp1O89090 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.48■□□□□ 0.23
Sp1O89090 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.48■□□□□ 0.23
Sp1O89090 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp1O89090 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp1O89090 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Sp1O89090 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp1O89090 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp1O89090 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp1O89090 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sp1O89090 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sp1O89090 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sp1O89090 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sp1O89090 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Sp1O89090 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sp1O89090 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sp1O89090 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
Sp1O89090 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sp1O89090 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.47■□□□□ 0.23
Sp1O89090 Gm28659-201ENSMUST00000188013 759 ntBASIC16.47■□□□□ 0.23
Sp1O89090 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.47■□□□□ 0.23
Sp1O89090 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.47■□□□□ 0.23
Sp1O89090 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sp1O89090 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sp1O89090 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sp1O89090 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.47■□□□□ 0.23
Sp1O89090 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sp1O89090 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sp1O89090 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Sp1O89090 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Sp1O89090 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.47■□□□□ 0.23
Sp1O89090 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.46■□□□□ 0.23
Sp1O89090 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sp1O89090 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sp1O89090 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms