Protein–RNA interactions for Protein: O88967

Yme1l1, ATP-dependent zinc metalloprotease YME1L1, mousemouse

Known RBP Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Yme1l1O88967 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Yme1l1O88967 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Yme1l1O88967 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Yme1l1O88967 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Yme1l1O88967 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Yme1l1O88967 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Yme1l1O88967 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Yme1l1O88967 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.12■□□□□ 0.33
Yme1l1O88967 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Yme1l1O88967 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Yme1l1O88967 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Yme1l1O88967 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Yme1l1O88967 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.11■□□□□ 0.33
Yme1l1O88967 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Yme1l1O88967 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Yme1l1O88967 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Yme1l1O88967 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Yme1l1O88967 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Yme1l1O88967 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.11■□□□□ 0.33
Yme1l1O88967 Gm9172-201ENSMUST00000212092 954 ntBASIC17.11■□□□□ 0.33
Yme1l1O88967 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Yme1l1O88967 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Yme1l1O88967 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Yme1l1O88967 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Yme1l1O88967 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Yme1l1O88967 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Yme1l1O88967 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Yme1l1O88967 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Yme1l1O88967 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Yme1l1O88967 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Yme1l1O88967 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Yme1l1O88967 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Yme1l1O88967 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Yme1l1O88967 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Yme1l1O88967 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Yme1l1O88967 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.1■□□□□ 0.33
Yme1l1O88967 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Yme1l1O88967 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Yme1l1O88967 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.09■□□□□ 0.33
Yme1l1O88967 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Yme1l1O88967 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Yme1l1O88967 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Yme1l1O88967 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Yme1l1O88967 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.09■□□□□ 0.33
Yme1l1O88967 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Yme1l1O88967 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.09■□□□□ 0.33
Yme1l1O88967 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.09■□□□□ 0.33
Yme1l1O88967 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.09■□□□□ 0.33
Yme1l1O88967 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.09■□□□□ 0.33
Yme1l1O88967 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.09■□□□□ 0.33
Yme1l1O88967 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.09■□□□□ 0.33
Yme1l1O88967 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.09■□□□□ 0.33
Yme1l1O88967 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Yme1l1O88967 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Yme1l1O88967 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Yme1l1O88967 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Yme1l1O88967 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Yme1l1O88967 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Yme1l1O88967 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Yme1l1O88967 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Yme1l1O88967 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Yme1l1O88967 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Yme1l1O88967 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Yme1l1O88967 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Yme1l1O88967 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Yme1l1O88967 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Yme1l1O88967 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Yme1l1O88967 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Yme1l1O88967 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Yme1l1O88967 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Yme1l1O88967 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Yme1l1O88967 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.08■□□□□ 0.33
Yme1l1O88967 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Yme1l1O88967 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.08■□□□□ 0.32
Yme1l1O88967 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Yme1l1O88967 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Yme1l1O88967 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Yme1l1O88967 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Yme1l1O88967 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Yme1l1O88967 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Yme1l1O88967 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Yme1l1O88967 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.07■□□□□ 0.32
Yme1l1O88967 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.07■□□□□ 0.32
Yme1l1O88967 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.07■□□□□ 0.32
Yme1l1O88967 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Yme1l1O88967 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Yme1l1O88967 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Yme1l1O88967 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Yme1l1O88967 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.07■□□□□ 0.32
Yme1l1O88967 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Yme1l1O88967 Gm4995-201ENSMUST00000117247 432 ntBASIC17.07■□□□□ 0.32
Yme1l1O88967 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Yme1l1O88967 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Yme1l1O88967 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Yme1l1O88967 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Yme1l1O88967 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Yme1l1O88967 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Yme1l1O88967 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Yme1l1O88967 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Yme1l1O88967 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms